Job Description Q46915 Confidence 100.00% Date Thu Jan 5 12:35:49 GMT 2012 Rank 88 Aligned Residues 327 % Identity 17% Template c2oktA_ PDB info PDB header:lyase Chain: A: PDB Molecule:o-succinylbenzoic acid synthetase; PDBTitle: crystal structure of o-succinylbenzoic acid synthetase from2 staphylococcus aureus, ligand-free form Resolution 1.30 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.											.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.
Query Sequence		V	I	T	D	M	K	V	I	P	V	A	G	H	D	S	M	L	L	N	I	G	G	A	H	N	A	Y	F	T	R	N	I	V	V	L	T	D	N	A	G	H	T	G	I	G	E	A	P	G	G	.	.	.	.	.	.	.	.	.	.	D	V	I	Y	Q	T	L	V	D	A	I	P	M	V	L	G	Q	E	V	A
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.
Alig confidence																																																				.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	L	T	A	L	H	F	Y	K	Y	S	E	P	F	K	S	Q	I	V	T	P	K	V	T	L	T	H	R	D	C	L	F	I	E	L	I	D	D	K	G	N	A	Y	F	G	E	C	N	A	F	Q	T	D	W	Y	D	H	E	T	I	A	S	V	K	H	V	I	E	Q	W	F	E	D	N	R	N	K	S	F	E
Template Known Secondary structure																						S	S																T	T											B	S	S	T	T	S		S		B																T	T			B
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	N	K	V	V	Q	Q	V	H	K	G	N	Q	A	A	D	F	D	T	F	G	K	G	A	W	T	F	E	L	R	V	N	A	V	A	A	L	E	A	A	L	L	D	L	L	G	K	A	L	N	V	P	V	C	E	L	L	G	P	G	K	Q	R	E	A	I	T	V	L	G	Y	L	F	Y	I	G	D	R	T
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.									.									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.									.									.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	Y	E	A	A	L	K	L	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	E	N	T	P	A	A	R	A	T	I	V	M	A	L	Y	Q	M	F	H	V	.	.	.	L	P	S	F	S	V	A	Y	.	G	A	T	A	S	G	L	S	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S							T	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	T	T															T	T			.	.	.									.					S	S			.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.									.									.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.																	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.				.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	D	L	P	Y	V	E	N	T	P	G	N	H	E	W	Y	Q	L	R	H	Q	K	A	M	N	S	E	A	V	V	R	L	A	E	A	S	Q	D	R	Y	G	F	K	D	F	K	L	K	G	G	V	L	P	G	E	Q	E	I	D	T	V	R	A	L	K	K	R	F	P	D	A	R	I	T	V	D	P	N	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.												.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.												.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	K	Q	L	E	S	L	K	A	T	.	K	P	T	R	I	K	L	K	W	T	P	.	.	.	.	Q	I	M	H	Q	I	R	V	L	R	E	L	D	F	H	F	Q	L	V	I	D	A	N	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.			S								T	.	.	.	.	T									T	T	S	S	S									T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.												.	.	.	.
Template SS confidence
																																130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150					.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.
Predicted Secondary structure																			.																																																												.
Query SS confidence																			.																																																												.
Query Sequence		A	W	L	L	D	E	A	I	S	L	C	K	G	L	N	D	V	.	L	T	Y	A	E	D	P	C	G	A	E	Q	G	F	S	G	R	E	V	M	A	E	F	R	R	A	T	G	L	P	V	A	T	N	M	I	A	T	N	W	R	E	M	G	H	A	V	M	L	N	A	V	D	I	P	L	A	D	P	.	H	F
Query Conservation																			.																																																												.
Alig confidence												.							.													.	.	.	.	.	.																																										.
Template Conservation												.																				.	.	.	.	.	.
Template Sequence		S	L	D	R	Q	D	F	T	Q	L	.	Q	L	L	A	R	E	Q	V	L	Y	I	E	E	P	F	K	D	I	S	.	.	.	.	.	.	M	L	D	E	V	A	D	G	T	I	P	P	I	A	L	D	E	K	A	T	S	L	L	D	I	I	N	L	I	E	L	Y	N	V	K	V	V	V	L	K	P	F	R	L
Template Known Secondary structure					G	G	G					.				G	G	G										S	S	G	G	.	.	.	.	.	.	G	G	G	G	S		T	T	S	S						S	T	T														S
Template Predicted Secondary structure												.																				.	.	.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.							.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	T	L	S	G	A	V	R	V	A	Q	L	C	D	D	W	G	L	T	W	G	C	H	S	N	N	H	F	D	I	S	L	A	M	F	T	H	V	G	A	A	A	P	G	N	P	T	A	I	D	T	H	W	I	W	Q	E	G	D	C	R	L	T	Q	N	P	L	E	I	K	N	G	K	I	A	V	P	D	A	P
Query Conservation
Alig confidence																																								.									.	.																													.	.
Template Conservation																																								.									.	.																													.	.
Template Sequence		G	G	I	D	K	V	Q	T	A	I	D	T	L	K	S	H	G	A	K	V	V	I	G	G	M	Y	E	Y	G	L	S	R	Y	F	T	A	M	L	.	A	R	K	G	D	Y	P	G	.	.	D	V	T	P	A	G	Y	Y	F	E	Q	D	V	V	A	H	S	G	I	L	K	E	G	R	L	E	F	R	.	.	P
Template Known Secondary structure		T	S	G	G	G											T	T						B		S	S													.		T	T	S	S	S			.	.	B				T	T	S	S		S	S		S	S	T	T	T	T				T	T						.	.
Template Predicted Secondary structure																																								.									.	.																													.	.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.		.	.	.	.	290	.	.	.			.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.			.
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	G	V	E	L	D	W	E	Q	V	Q	K	A	H	E	A	Y	K	R	L
Query Conservation
Alig confidence				.	.	.
Template Conservation				.	.	.
Template Sequence		P	L	.	.	.	V	D	I	T	Q	L	Q	P	Y	E	G	H	H	H	H	H
Template Known Secondary structure				.	.	.			G	G	G				S	S	S	T	T
Template Predicted Secondary structure				.	.	.
Template SS confidence
		323	.				.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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