Job Description Q46915 Confidence 100.00% Date Thu Jan 5 12:35:49 GMT 2012 Rank 12 Aligned Residues 358 % Identity 20% Template c2o56D_ PDB info PDB header:structural genomics, unknown function Chain: D: PDB Molecule:putative mandelate racemase; PDBTitle: crystal structure of a member of the enolase superfamily from2 salmonella typhimurium Resolution 2.00 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.						.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																		.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.
Query Sequence		V	I	T	D	M	K	V	I	P	V	A	G	H	D	S	M	L	L	N	I	G	G	A	H	N	A	Y	F	T	R	N	I	V	V	L	T	D	N	A	G	H	T	G	I	G	E	A	P	.	.	.	.	.	G	G	D	V	I	Y	Q	T	L	V	D	A	I	P	M	V	L	G	Q	E	V	A	R	L	N	K	V
Query Conservation																																																		.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	T	S	V	D	I	I	D	V	A	N	D	F	K	.	.	.	.	.	.	.	.	.	.	.	.	W	R	P	V	V	V	K	I	N	T	D	E	G	I	S	G	F	G	E	V	G	L	A	Y	G	V	G	A	S	A	G	I	G	M	A	K	D	L	S	A	I	I	I	G	M	D	P	M	N	N	E	A	I
Template Known Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.											T	T	S								S		S	S	S	S																	T	T	S		T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.													.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	Q	V	H	K	G	N	Q	A	A	D	F	D	T	F	G	K	G	A	W	T	F	E	L	R	V	N	A	V	A	A	L	E	A	A	L	L	D	L	L	G	K	A	L	N	V	P	V	C	E	L	L	G	P	G	K	Q	R	E	A	I	T	V	L	G	Y	L	F	Y	I	G	D	R	T	K	T	D	L	P
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.																														.																							.	.	.
Template Conservation																			.	.	.	.	.	.	.	.																														.																							.	.	.
Template Sequence		W	E	K	M	L	K	K	T	F	W	G	Q	G	G	G	G	I	.	.	.	.	.	.	.	.	F	S	A	A	M	S	G	I	D	I	A	L	W	D	I	K	G	K	A	W	G	V	P	L	Y	K	M	L	G	.	G	K	S	R	E	K	I	R	T	Y	A	S	Q	L	Q	F	G	W	G	D	G	S	.	.	.
Template Known Secondary structure								S	S	S	G	G	G	G					.	.	.	.	.	.	.	.																					T		B					T	T	.			S		S									G	G	G			S	T	T		.	.	.
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.																														.																							.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.									.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.																			.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	V	E	N	T	P	G	N	H	E	W	Y	Q	L	R	H	Q	K	A	M	N	S	E	A	V	V	R	L	A	E	A	S	Q	D	R	Y	G	F	K	D	F	K	L	K	G	G	V	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	Q	E	I	D	T	V	R	A	L	K	K
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	D	M	L	T	E	P	E	Q	Y	A	Q	A	A	L	T	A	V	S	E	.	G	Y	D	A	I	K	V	D	T	V	A	M	D	R	H	G	N	W	N	Q	Q	N	L	N	G	P	L	T	D	K	I	L	R	L	G	Y	D	R	M	A	A	I	R	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T					S														T	.	T		S							S	S	B		T	T	S		B	S		S				S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template SS confidence
																144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		225	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure				.																													.
Query SS confidence				.																													.
Query Sequence		R	F	.	P	D	A	R	I	T	V	D	P	N	G	A	W	L	L	D	E	A	I	S	L	C	K	G	L	N	D	V	.	L	T	Y	A	E	D	P	C	G	A	E	Q	G	F	S	G	R	E	V	M	A	E	F	R	R	A	T	G	L	P	V	A	T	N	M	I	A	T	N	W	R	E	M	G	H	A	V	M
Query Conservation				.																													.
Alig confidence				.																													.													.	.	.	.
Template Conservation																																														.	.	.	.
Template Sequence		A	V	G	P	D	V	D	I	I	A	E	M	H	A	F	T	D	T	T	S	A	I	Q	F	G	R	M	I	E	E	L	G	I	F	Y	Y	E	E	P	V	M	P	L	N	.	.	.	.	P	A	Q	M	K	Q	V	A	D	K	V	N	I	P	L	A	A	G	E	R	I	Y	W	R	W	G	Y	R	P	F	L	E
Template Known Secondary structure					T	T	S							T	T		S													G	G	G								S	S		S	S	S	.	.	.	.													S						T	T
Template Predicted Secondary structure																																														.	.	.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.					.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		303	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		L	N	A	V	D	I	P	L	A	D	P	.	H	F	W	T	L	S	G	A	V	R	V	A	Q	L	C	D	D	W	G	L	T	W	G	C	H	S	N	N	H	F	D	I	S	L	A	M	F	T	H	V	G	A	A	A	P	G	N	P	T	A	I	D	T	H	W	I	W	Q	E	G	D	C	R	L	T	Q	N	P
Query Conservation													.
Alig confidence													.																												.
Template Conservation																																									.
Template Sequence		N	G	S	L	S	V	I	Q	P	D	I	C	T	C	G	G	I	T	E	V	K	K	I	C	D	M	A	H	V	Y	D	K	T	V	Q	I	H	V	C	.	G	G	P	I	S	T	A	V	A	L	H	M	E	T	A	I	P	N	F	V	I	H	E	L	H	R	Y	A	L	L	E	P	N	T	Q	T	C	K	Y	N
Template Known Secondary structure		T	T			S						T	T	T	T	T														T	T	T									.	S																S	S	B							G	G	G	G	S					T	T	B	S
Template Predicted Secondary structure																																									.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.		.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	I	K	N	G	K	I	A	V	P	D	A	P	G	L	G	V	E	L	D	W	E	Q	V	Q	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	L	P	K	N	G	M	Y	E	V	P	E	L	P	G	I	G	Q	E	L	T	E	E	T	M	K	K	S
Template Known Secondary structure					B	T	T							S	S	B	T	S			B							T	S
Template Predicted Secondary structure
Template SS confidence
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.