Job Description Q46915 Confidence 100.00% Date Thu Jan 5 12:35:49 GMT 2012 Rank 119 Aligned Residues 325 % Identity 13% Template c2fymA_ PDB info PDB header:lyase Chain: A: PDB Molecule:enolase; PDBTitle: crystal structure of e. coli enolase complexed with the2 minimal binding segment of rnase e. Resolution 1.60 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.																									.	.	.	.	60	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	I	T	D	M	K	V	I	P	V	A	G	H	D	S	M	L	L	N	I	G	G	A	H	N	A	Y	F	T	R	N	I	V	V	L	T	D	N	A	G	H	T	G	I	G	E	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	D	V	I	Y	Q	T
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	V	K	I	I	G	R	E	I	.	.	.	.	.	.	.	.	.	.	.	.	I	D	S	R	G	N	P	T	V	E	A	E	V	H	L	E	G	G	F	V	G	M	A	A	A	P	S	G	A	S	T	G	S	R	E	A	L	E	L	R	D	G	D	K	S	R	F	L	G	K	G	V	T	K	A	V	A	A
Template Known Secondary structure		B										.	.	.	.	.	.	.	.	.	.	.	.			T	T	S											T	T	S												S	S		S	S	S									T	T	S	G	G	G	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.													.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		64	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		L	V	D	.	A	I	P	M	V	L	G	Q	E	V	A	R	L	N	K	V	V	Q	Q	V	H	K	G	N	Q	A	A	D	F	D	T	F	G	K	G	A	W	T	F	E	L	R	V	N	A	V	A	A	L	E	A	A	L	L	D	L	L	G	K	A	L	N	V	P	V	C	E	L	L	G	P	G	K	Q	R	E
Query Conservation					.
Alig confidence					.																																		.	.	.	.	.	.	.	.	.																													.
Template Conservation																																							.	.	.	.	.	.	.	.	.																													.
Template Sequence		V	N	G	P	I	A	Q	A	L	I	G	K	D	A	K	D	Q	A	G	I	D	K	I	M	I	D	L	D	G	T	E	N	K	S	K	F	G	.	.	.	.	.	.	.	.	.	A	N	A	I	L	A	V	S	L	A	N	A	K	A	A	A	A	A	K	G	M	P	L	Y	E	H	I	A	.	E	L	N	G	T
Template Known Secondary structure				T							T	T	S	B	T	T															S	T	T		T	T	T		.	.	.	.	.	.	.	.	.																			T	T	S								.			T	T
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.																													.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.										.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190					.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.
Predicted Secondary structure																																																		.	.	.	.																							.	.
Query SS confidence																																																		.	.	.	.																							.	.
Query Sequence		A	I	T	V	L	G	Y	L	F	Y	I	G	D	R	T	K	T	D	L	P	Y	V	E	N	T	P	G	N	H	E	W	Y	Q	L	R	H	Q	K	A	M	N	S	E	A	V	V	R	L	.	.	.	.	A	E	A	S	Q	D	R	Y	G	F	K	D	F	K	L	K	G	G	V	L	P	G	.	.	E	Q	E	I
Query Conservation																																																		.	.	.	.																							.	.
Alig confidence																																																		.	.	.	.																							.	.
Template Conservation
Template Sequence		P	G	K	Y	S	M	P	V	P	M	M	N	I	I	N	G	G	E	H	A	D	N	N	V	D	I	Q	E	F	M	I	Q	P	V	G	A	K	T	V	K	E	A	I	R	M	G	S	E	V	F	H	H	L	A	K	V	L	K	A	K	G	M	N	T	A	V	G	D	E	G	G	Y	A	P	N	L	G	S	N	A
Template Known Secondary structure		T	T															G	G	G	S	S	S	S			S	S							T	T		S	S																						T	T					B		T	T	S		B					S	S
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		217	.	.	220	.	.	.	.	.									.	.	.	.	230	.	.	.	.																		.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.				.
Query SS confidence											.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.				.
Query Sequence		D	T	V	R	A	L	K	K	R	.	.	.	.	.	.	.	.	F	P	D	A	R	I	T	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	N	G	A	W	L	L	D	E	A	I	S	L	C	K	G	L	.	N	D	V	.	L	T	Y	A	E	D	P	C	G	A	E	Q	G	F	S
Query Conservation											.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.				.
Alig confidence											.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.				.													.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		E	A	L	A	V	I	A	E	A	V	K	A	A	G	Y	E	L	G	K	D	I	T	L	A	M	D	C	A	A	S	E	F	Y	K	D	G	K	Y	V	L	A	G	E	G	N	K	A	F	T	S	E	E	F	T	H	F	L	E	E	L	T	K	Q	Y	P	I	V	S	I	E	D	G	L	D	E	S	D	.	.	.
Template Known Secondary structure														T	T			B	T	T	T	B								G	G	G	G			T	T					G	G	G	T	T																			S							S		S		T	T		.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.				.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.
Predicted Secondary structure																				.	.	.																											.																									.
Query SS confidence																				.	.	.																											.																									.
Query Sequence		G	R	E	V	M	A	E	F	R	R	A	T	G	L	P	V	A	T	.	.	.	N	M	I	A	T	N	W	R	E	M	G	H	A	V	M	L	N	A	V	D	I	P	L	A	D	P	.	H	F	W	T	L	S	G	A	V	R	V	A	Q	L	C	D	D	W	G	L	T	W	G	C	.	H	S	N	N	H	F	D
Query Conservation																				.	.	.																											.																									.
Alig confidence		.																		.	.	.																											.																									.
Template Conservation		.
Template Sequence		.	W	D	G	F	A	Y	Q	T	K	V	L	G	D	K	I	Q	L	V	G	D	D	L	F	V	T	N	T	K	I	L	K	E	G	I	E	K	G	I	A	N	S	I	L	I	K	F	N	Q	I	G	S	L	T	E	T	L	A	A	I	K	M	A	K	D	A	G	Y	T	A	V	I	S	H	R	S	G	E	T	E
Template Known Secondary structure		.												T	T	T	S					S	T	T	T	T	T											T	T			S						G	G	G	T		S														T	T									S	S			S
Template Predicted Secondary structure		.
Template SS confidence
			297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
		345	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	L	A	M	F	T	H	V	G	A	A	A	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	T	I	A	D	L	A	V	G	T	A	A	G
Template Known Secondary structure												T	T
Template Predicted Secondary structure
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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