Job Description Q46915 Confidence 39.03% Date Thu Jan 5 12:35:49 GMT 2012 Rank 263 Aligned Residues 118 % Identity 13% Template c2ekcA_ PDB info PDB header:lyase Chain: A: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: structural study of project id aq_1548 from aquifex aeolicus vf5 Resolution 2.00 Å

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		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.																						270	.	.	.	.
Predicted Secondary structure																																								.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	T	V	R	A	L	K	K	R	F	P	D	A	R	I	T	V	D	P	N	G	A	W	L	L	D	E	A	I	S	L	C	K	G	L	N	D	V	.	L	T	Y	A	E	D	P	C	G	A	E	Q	G	F	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	E	V	M
Query Conservation																																								.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	K	F	T	E	L	K	E	K	R	E	K	A	L	V	S	Y	L	M	V	G	Y	P	D	Y	E	T	S	L	K	A	F	K	E	V	L	K	N	G	T	D	I	L	E	I	G	F	P	F	S	D	P	V	A	D	G	P	T	I	Q	V	A	H	E	V	A	L	K	N	G	I	R	F	E	D	V	L	E	L	S
Template Known Secondary structure											T	B									T	T	S	S															T	T		S									S			T	T	S														T	T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		275	.	.	.	.	280		.	.	.	.	.	.	.						.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.		.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure								.								.	.	.	.	.																					.
Query SS confidence								.								.	.	.	.	.																					.
Query Sequence		A	E	F	R	R	A	.	T	G	L	P	V	A	T	.	.	.	.	.	N	M	I	A	T	N	W	R	E	M	G	H	A	V	M	L	N	A	V	D	.	I	P	L	A	D	P	H	F	W	T	L	S	G	A	V	R	V	A	Q	L	C	D	D	W	G	L	T	W	G	C
Query Conservation								.								.	.	.	.	.																					.
Alig confidence								.								.	.	.	.	.																					.							.	.	.
Template Conservation																																																.	.	.
Template Sequence		E	T	L	R	K	E	F	P	D	I	P	F	L	L	M	T	Y	Y	N	P	I	F	R	I	G	L	E	K	F	C	R	L	S	R	E	K	G	I	D	G	F	I	V	P	D	L	.	.	.	P	P	E	E	A	E	E	L	K	A	V	M	K	K	Y	V	L	S	F	V	P
Template Known Secondary structure									T	T	S																										T	T							T	T		.	.	.															T	T
Template Predicted Secondary structure																																																.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.				.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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