Job Description Q46915 Confidence 100.00% Date Thu Jan 5 12:35:49 GMT 2012 Rank 15 Aligned Residues 351 % Identity 23% Template c2chrA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:chloromuconate cycloisomerase; PDBTitle: a re-evaluation of the crystal structure of chloromuconate2 cycloisomerase Resolution 3.00 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.												60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	I	T	D	M	K	V	I	P	V	A	G	H	D	S	M	L	L	N	I	G	G	A	H	N	A	Y	F	T	R	N	I	V	V	L	T	D	N	A	G	H	T	G	I	G	E	A	P	G	G	D	V	.	.	.	.	.	.	.	.	.	.	.	I	Y	Q	T	L	V	D	A	I	P	M	V	L	G	Q	E	V
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.
Template Sequence		K	I	D	A	I	E	A	V	I	V	D	V	P	T	K	R	P	I	Q	M	S	I	T	T	V	H	Q	Q	S	Y	V	I	V	R	V	Y	S	E	.	G	L	V	G	V	G	E	G	G	S	V	G	G	P	V	W	S	A	E	C	A	E	T	I	K	I	I	V	E	R	Y	L	A	P	H	L	L	G	T	D	A
Template Known Secondary structure																						S	S															B	T	.	T	B									S	T	T	T	T	T	S	S														T					T	T	S		T
Template Predicted Secondary structure																																								.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	L	N	K	V	V	Q	Q	V	H	K	G	N	Q	A	A	D	F	D	T	F	G	K	G	A	W	T	F	E	L	R	V	N	A	V	A	A	L	E	A	A	L	L	D	L	L	G	K	A	L	N	V	P	V	C	E	L	L	G	P	G	K	Q	R	E	A	I	T	V	L	G	Y	L	F	Y	I	G	D	R
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.																		.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.																		.	.
Template Sequence		F	N	V	S	G	A	L	Q	T	M	A	R	A	V	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	S	A	K	A	A	V	E	M	A	L	L	D	L	K	A	R	A	L	G	V	S	I	A	E	L	L	G	.	G	P	L	R	S	A	I	P	I	A	W	T	L	A	S	G	D	.	.
Template Known Secondary structure		T											T	T		S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				T	T							T	T	.			S		S				B						S	S		.	.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.																		.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.																.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		T	K	T	D	L	P	Y	V	E	N	T	P	G	N	H	E	W	Y	Q	L	R	H	Q	K	A	M	N	S	E	A	V	V	R	L	A	E	A	S	Q	D	R	Y	G	F	K	D	F	K	L	K	G	G	V	L	P	G	E	Q	E	I	D	T	V	R	A	L	K	K	R	F	.	P	D	A	R	I	T	V	D	P
Query Conservation																																																																								.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.																													.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	K	R	D	L	D	S	A	V	E	M	I	E	R	R	.	R	H	N	R	F	K	V	K	L	G	F	R	S	P	Q	D	D	L	I	H	M	E	A	L	S	N	S	L	G	S	K	A	Y	L	R	V	D	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T	.	S									S	S	S																T	T	T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template SS confidence
																												143	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																					.																																																												.
Query SS confidence																					.																																																												.
Query Sequence		N	G	A	W	L	L	D	E	A	I	S	L	C	K	G	L	N	D	V	.	L	T	Y	A	E	D	P	C	G	A	E	Q	G	F	S	G	R	E	V	M	A	E	F	R	R	A	T	G	L	P	V	A	T	N	M	I	A	T	N	W	R	E	M	G	H	A	V	M	L	N	A	V	D	I	P	L	A	D	P	.
Query Conservation																					.																																																												.
Alig confidence																					.													.	.	.	.																																												.
Template Conservation																																		.	.	.	.
Template Sequence		N	Q	A	W	D	E	Q	V	A	S	V	Y	I	P	E	L	E	A	L	G	V	E	L	I	E	Q	P	V	G	R	E	N	.	.	.	.	T	Q	A	L	R	R	L	S	D	N	N	R	V	A	I	M	A	D	E	S	L	S	T	L	A	S	A	F	D	L	A	R	D	R	S	V	D	V	F	S	L	K	L	C
Template Known Secondary structure		T	T				T												T	T	T								S		S	S		.	.	.	.												S	S					S	S	S			S									T	T	T			S
Template Predicted Secondary structure																																		.	.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.					.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	F	W	T	L	S	G	A	V	R	V	A	Q	L	C	D	D	W	G	L	T	W	G	C	H	S	N	N	H	F	D	I	S	L	A	M	F	T	H	V	G	A	A	A	P	G	N	P	T	A	I	D	T	H	W	I	W	Q	E	G	D	C	R	L	T	Q	N	P	L	E	I	K	N	G	K	I	A	V	P	D
Query Conservation
Alig confidence																																																															.
Template Conservation																																																															.
Template Sequence		N	M	G	G	V	S	A	T	Q	K	I	A	A	V	A	E	A	S	G	I	A	S	Y	G	G	T	M	L	D	S	T	I	G	T	S	V	A	L	Q	L	Y	S	T	V	P	S	L	P	F	G	C	E	L	I	G	P	F	V	L	A	D	.	T	L	S	H	E	P	L	E	I	R	D	Y	E	L	Q	V	P	T
Template Known Secondary structure				T	S															T									S														T	T	S	S			T	T		B								B	S		.		S	B	S					B		S	S
Template Predicted Secondary structure																																																															.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.		.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	G	L	G	V	E	L	D	W	E	Q	V	Q	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	G	H	G	M	T	L	D	E	D	K	V	R	Q	Y
Template Known Secondary structure		S	S	S	T	T			B
Template Predicted Secondary structure
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions