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Job DescriptionQ46915
Confidence39.14%DateThu Jan 5 12:35:49 GMT 2012
Rank262Aligned Residues142
% Identity18%Templatec1zlpA_
PDB info PDB header:lyaseChain: A: PDB Molecule:petal death protein; PDBTitle: petal death protein psr132 with cysteine-linked glutaraldehyde forming2 a thiohemiacetal adduct
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   183......190.........200.........210 .........220...... ...230. ........240.....
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Query Sequence  NSEAVVRLAEASQDRYGFKDFKLKGGVL. . . . . . . . . . . . . PGEQEIDTVRALKKRF. . PDARI. . TVDPNGAWLLDEAI
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Template Sequence  GPLNVQRFIRELISA. GAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTDARAPHGLEEGI
Template Known Secondary structure  ST.T


B
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   114.....120........ .130.........140.........150.........160.........170.........180.........190..
 
   246...250... ......260.........270.........280.........290.... .....300.........310.. ......
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Query Sequence  SLCKGLND. . . VLTYAEDPCGAEQGFSGREVMAEFRRATGLPVATNMIATNW. . . REMGHAVMLNAVDIPLAD. PHFWTL
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Template Sequence  RRANLYKEAGADATFVEAPAN. . . . . . . VDELKEVSAKTKGLRIANMIEGGKTPLHTPEEFKEMGFHLIAHSLTAVYATA
Template Known Secondary structure  TT
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   193......200.........210... ......220.........230.........240.........250.........260.....
 
   319320.........330..
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Query Sequence  SGAVRVAQLCDDWG
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Template Sequence  RALVNIMKILKEKG
Template Known Secondary structure  S
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   266...270.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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