Job Description Q46915 Confidence 100.00% Date Thu Jan 5 12:35:49 GMT 2012 Rank 74 Aligned Residues 346 % Identity 20% Template c1wufB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein lin2664; PDBTitle: crystal structure of protein gi:16801725, member of enolase2 superfamily from listeria innocua clip11262 Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.												60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	I	T	D	M	K	V	I	P	V	A	G	H	D	S	M	L	L	N	I	G	G	A	H	N	A	Y	F	T	R	N	I	V	V	L	T	D	N	A	G	H	T	G	I	G	E	A	P	G	G	D	V	.	.	.	.	.	.	.	.	.	.	.	I	Y	Q	T	L	V	D	A	I	P	M	V	L	G	Q	E	V
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	F	Q	K	A	R	L	I	H	A	E	L	P	L	L	A	P	F	K	T	S	Y	G	E	L	K	S	K	D	F	Y	I	I	E	L	I	N	E	E	G	I	H	G	Y	G	E	L	E	A	F	P	L	P	D	Y	T	E	E	T	L	S	S	A	I	L	I	I	K	E	Q	L	L	P	L	L	A	Q	R	K	I
Template Known Secondary structure																						T	T																S	S	S											S	S	T	T	S	S	S													T	T
Template Predicted Secondary structure
Template SS confidence
		2002	.	.	.	.	.	.	.	2010	.	.	.	.	.	.	.	.	.	2020	.	.	.	.	.	.	.	.	.	2030	.	.	.	.	.	.	.	.	.	2040	.	.	.	.	.	.	.	.	.	2050	.	.	.	.	.	.	.	.	.	2060	.	.	.	.	.	.	.	.	.	2070	.	.	.	.	.	.	.	.	.	2080	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	L	N	K	V	V	Q	Q	V	H	K	G	N	Q	A	A	D	F	D	T	F	G	K	G	A	W	T	F	E	L	R	V	N	A	V	A	A	L	E	A	A	L	L	D	L	L	G	K	A	L	N	V	P	V	C	E	L	L	G	P	G	K	Q	R	E	A	I	T	V	L	G	Y	L	F	Y	I	G	D	R
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.		.																.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.		.																.	.
Template Sequence		R	K	P	E	E	I	Q	E	L	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	W	I	Q	G	N	E	M	A	K	A	A	V	E	L	A	V	W	D	A	F	A	K	M	E	K	R	S	L	A	K	M	I	G	.	A	.	T	K	E	S	I	K	V	G	V	S	I	G	L	Q	Q	.	.
Template Known Secondary structure		S	S	T	T						T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S		S																				T	T	S	B					T	T	.		.			S				B								S	.	.
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.		.																.	.
Template SS confidence
		2082	.	.	.	.	.	.	.	2090	.																	.	.	.	.	.	.	.	.	2100	.	.	.	.	.	.	.	.	.	2110	.	.	.	.	.	.	.	.	.	2120	.	.	.	.	.		.		.	.	.	2130	.	.	.	.	.	.	.	.	.	2140	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	T	D	L	P	Y	V	E	N	T	P	G	N	H	E	W	Y	Q	L	R	H	Q	K	A	M	N	S	E	A	V	V	R	L	A	E	A	S	Q	D	R	Y	G	F	K	D	F	K	L	K	G	G	V	L	P	G	E	Q	E	I	D	T	V	R	A	L	K	K	R	F	P	D	A	R	I	T	V	D	P	N
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.												.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.												.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	V	E	T	L	L	Q	L	V	N	Q	Y	V	D	Q	.	G	Y	E	R	V	K	L	K	I	A	P	.	.	.	N	K	D	I	Q	F	V	E	A	V	R	K	S	F	P	K	L	S	L	M	A	D	A	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	T									B	T	.	.	.	T	B	S									T	T		T	T	S							T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.												.	.	.
Template SS confidence
																												2142	.	.	.	.	.	.	.	2150	.	.	.	.	.	.		.	.	.	2160	.	.	.	.	.	.	.				.	.	2170	.	.	.	.	.	.	.	.	.	2180	.	.	.	.	.	.	.	.	.	2190	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.
Predicted Secondary structure																				.																																																												.
Query SS confidence																				.																																																												.
Query Sequence		G	A	W	L	L	D	E	A	I	S	L	C	K	G	L	N	D	V	.	L	T	Y	A	E	D	P	C	G	A	E	Q	G	F	S	G	R	E	V	M	A	E	F	R	R	A	T	G	L	P	V	A	T	N	M	I	A	T	N	W	R	E	M	G	H	A	V	M	L	N	A	V	D	I	P	L	A	D	P	.	H
Query Conservation																				.																																																												.
Alig confidence													.							.													.	.	.	.																																												.
Template Conservation													.																				.	.	.	.
Template Sequence		S	A	Y	N	R	E	D	F	L	L	L	.	K	E	L	D	Q	Y	D	L	E	M	I	E	Q	P	F	G	T	K	D	.	.	.	.	F	V	D	H	A	W	L	Q	K	Q	L	K	T	R	I	C	L	D	E	N	I	R	S	V	K	D	V	E	Q	A	H	S	I	G	S	C	R	A	I	N	L	K	L	A	R
Template Known Secondary structure		T				G	G	G					.					T	T	T		S						S		S	S		.	.	.	.	S								T	T		S	S						T	T			S											T			S						T	G	G
Template Predicted Secondary structure													.																				.	.	.	.
Template SS confidence
		2192	.	.	.	.	.	.	.	2200	.	.		.	.	.	.	.	.	.	2210	.	.	.	.	.	.	.	.	.	2220	.					.	.	.	.	.	.	.	.	2230	.	.	.	.	.	.	.	.	.	2240	.	.	.	.	.	.	.	.	.	2250	.	.	.	.	.	.	.	.	.	2260	.	.	.	.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	W	T	L	S	G	A	V	R	V	A	Q	L	C	D	D	W	G	L	T	W	G	C	H	S	N	N	H	F	D	I	S	L	A	M	F	T	H	V	G	A	A	A	P	G	N	P	T	A	I	D	T	H	W	I	W	Q	E	G	D	C	R	L	T	Q	N	P	L	E	I	K	N	G	K	I	A	V	P	D	A
Query Conservation
Alig confidence																																																		.
Template Conservation																																																		.
Template Sequence		V	G	G	M	S	S	A	L	K	I	A	E	Y	C	A	L	N	E	I	L	V	W	C	G	G	M	L	E	A	G	V	G	R	A	H	N	I	A	L	A	A	R	N	E	F	V	F	P	.	G	D	I	S	A	S	N	R	F	F	A	E	D	I	V	T	P	A	F	E	L	N	Q	G	R	L	K	V	P	T	N
Template Known Secondary structure		G	T	S														T	T																							T	S	S	S			S		.	B	S				G	G	G	T	B	S	S		S	B	S	S						S	S							S
Template Predicted Secondary structure																																																		.
Template SS confidence
		2267	.	.	2270	.	.	.	.	.	.	.	.	.	2280	.	.	.	.	.	.	.	.	.	2290	.	.	.	.	.	.	.	.	.	2300	.	.	.	.	.	.	.	.	.	2310	.	.	.	.		.	.	.	.	.	2320	.	.	.	.	.	.	.	.	.	2330	.	.	.	.	.	.	.	.	.	2340	.	.	.	.	.
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	L	G	V	E	L	D	W	E	Q	V	Q	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	G	I	G	V	T	L	D	L	K	V	L	K	K	Y
Template Known Secondary structure		S	B	T	S			B							T	T
Template Predicted Secondary structure
Template SS confidence
		2346	.	.	.	2350	.	.	.	.	.	.	.	.	.	2360

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions