Job Description Q46915 Confidence 100.00% Date Thu Jan 5 12:35:49 GMT 2012 Rank 20 Aligned Residues 363 % Identity 19% Template c1rvkA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:isomerase/lactonizing enzyme; PDBTitle: crystal structure of enolase agr_l_2751 from agrobacterium tumefaciens Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.				.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure															.																		.	.	.																														.
Query SS confidence															.																		.	.	.																														.
Query Sequence		V	I	T	D	M	K	V	I	P	V	A	G	H	.	D	S	M	L	L	N	I	G	G	A	H	N	A	Y	F	T	R	.	.	.	N	I	V	V	L	T	D	N	A	G	H	T	G	I	G	E	A	P	G	G	D	V	I	Y	Q	T	L	V	D	.	A	I	P	M	V	L	G	Q	E	V	A	R	L	N	K	V
Query Conservation															.																		.	.	.																														.
Alig confidence															.																		.	.	.																														.
Template Conservation
Template Sequence		I	I	T	D	V	E	V	R	V	F	R	T	T	T	R	R	H	S	D	S	A	G	H	A	H	P	G	P	A	H	Q	V	E	Q	A	X	L	T	V	R	T	E	D	G	Q	E	G	H	S	F	T	A	P	E	I	V	R	P	H	V	I	E	K	F	V	K	K	V	L	I	G	E	D	H	R	D	R	E	R	L
Template Known Secondary structure		B																			T	T	S																				T	T	S									G	G	G	G								T						T	T	S	B	T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	Q	V	H	K	G	N	Q	A	A	D	F	D	T	F	G	K	G	A	W	T	F	E	L	R	V	N	A	V	A	A	L	E	A	A	L	L	D	L	L	G	K	A	L	N	V	P	V	C	E	L	L	G	P	G	K	Q	R	E	A	I	T	V	L	G	Y	L	F	Y	I	G	D	R	T	K	T	D	L	P
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.																												.		.																					.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.																												.		.																					.	.	.
Template Sequence		W	Q	D	L	A	H	W	Q	R	G	S	A	A	Q	L	T	D	.	.	.	.	.	.	.	.	.	.	R	T	L	A	V	V	D	C	A	L	W	D	L	A	G	R	S	L	G	Q	P	V	Y	K	L	I	G	.	G	.	Y	R	D	K	V	L	A	Y	G	S	I	X	C	G	D	E	L	E	G	G	.	.	.
Template Known Secondary structure										T	T	T	T	T		S			.	.	.	.	.	.	.	.	.	.																			T		B							.		.	S		S															T	T	T	.	.	.
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.																												.		.																					.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.											.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.							.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.																			.
Query SS confidence																																																.	.	.	.	.	.																			.
Query Sequence		Y	V	E	N	T	P	G	N	H	E	W	Y	Q	L	R	H	Q	K	A	M	N	S	E	A	V	V	R	L	A	E	A	S	Q	D	R	Y	G	F	K	D	F	K	L	K	G	G	.	.	.	.	.	.	V	L	P	G	E	Q	E	I	D	T	V	R	A	L	K	K	R	F	.	P	D	A	R	I	T	V	D	P
Query Conservation																																																.	.	.	.	.	.																			.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.											.	.	.	.	.	.																			.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	T	P	E	D	Y	G	R	F	A	E	T	L	V	K	R	.	G	Y	K	G	I	K	L	H	T	W	X	P	P	V	S	W	A	P	D	V	K	X	D	L	K	A	C	A	A	V	R	E	A	V	G	P	D	I	R	L	X	I	D	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	S															.	T		S									T	T	S	T	T																				T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template SS confidence
																				147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.		.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																					.																																										.
Query SS confidence																					.																																										.
Query Sequence		N	G	A	W	L	L	D	E	A	I	S	L	C	K	G	L	N	D	V	.	L	T	Y	A	E	D	P	C	G	A	E	Q	G	F	S	G	R	E	V	M	A	E	F	R	R	A	T	G	L	P	V	A	T	N	M	I	A	T	N	W	R	.	E	M	G	H	A	V	M	L	N	A	V	D	I	P	L	A	D	P
Query Conservation																					.																																										.
Alig confidence																					.													.	.	.	.																										.
Template Conservation																																		.	.	.	.
Template Sequence		F	H	W	Y	S	R	T	D	A	L	A	L	G	R	G	L	E	K	L	G	F	D	W	I	E	E	P	X	D	E	Q	S	.	.	.	.	L	S	S	Y	K	W	L	S	D	N	L	D	I	P	V	V	G	P	E	S	A	A	G	K	H	W	H	R	A	E	W	I	K	A	G	A	C	D	I	L	R	T	G	V
Template Known Secondary structure			T	T															T	T	T		S						S		T	T		.	.	.	.												S	S						S	S		S	S											T	T			S
Template Predicted Secondary structure																																		.	.	.	.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.					240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
			314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	H	F	W	T	L	S	G	A	V	R	V	A	Q	L	C	D	D	W	G	L	T	W	G	C	H	S	N	N	H	F	D	I	S	L	A	M	F	T	H	V	G	A	A	A	P	G	N	P	T	A	I	D	T	H	W	I	W	Q	E	G	D	C	R	L	T	Q	N	P	L	E	I	K	N	G	K	I	A	V	P
Query Conservation		.
Alig confidence		.																																																		.
Template Conservation																																																				.
Template Sequence		N	D	V	G	G	I	T	P	A	L	K	T	X	H	L	A	E	A	F	G	X	E	C	E	V	H	G	N	T	A	X	N	L	H	V	V	A	A	T	K	N	C	R	W	Y	E	R	G	L	L	.	H	P	F	L	E	Y	D	D	G	H	D	Y	L	K	S	L	S	D	P	X	D	R	D	G	F	V	H	V	P
Template Known Secondary structure					T	S														T	T									S											S	S										.		T	T	S		G	G	G			T	T	B	S	S		S	S		B		T	T	S
Template Predicted Secondary structure																																																				.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.		.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	P	G	L	G	V	E	L	D	W	E	Q	V	Q	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	R	P	G	L	G	E	D	I	D	F	T	F	I	D	N	N
Template Known Secondary structure		S		S	B	T				B								T
Template Predicted Secondary structure
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions