Job Description Q46915 Confidence 100.00% Date Thu Jan 5 12:35:49 GMT 2012 Rank 106 Aligned Residues 311 % Identity 14% Template c1kczA_ PDB info PDB header:lyase Chain: A: PDB Molecule:beta-methylaspartase; PDBTitle: crystal structure of beta-methylaspartase from clostridium2 tetanomorphum. mg-complex. Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.																						.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Query Sequence		V	I	T	D	M	K	V	I	P	V	A	G	H	D	S	M	L	L	N	I	G	G	A	H	N	A	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	T	R	N	I	V	V	L	T	D	N	A	G	H	T	G	I	G	E	A	P	G	G	D	V	.	.	.	.	.	.	.
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	I	V	D	V	L	C	T	P	G	L	T	G	F	Y	F	D	D	Q	R	A	I	K	K	G	A	G	H	D	G	F	T	Y	T	G	S	T	V	T	E	G	F	T	Q	V	R	Q	K	G	E	S	I	S	V	L	L	V	L	E	D	G	Q	V	A	H	G	D	C	A	A	V	Q	Y	S	G	A	G	G	R	D
Template Known Secondary structure		B												S	S										T	T					T	T				S				S	T	T		S	S	S														T	T	S											T	T	T	T	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
									60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure		.	.	.	.	.	.	.								.
Query SS confidence		.	.	.	.	.	.	.								.
Query Sequence		.	.	.	.	.	.	.	I	Y	Q	T	L	V	D	.	A	I	P	M	V	L	G	Q	E	V	A	R	L	N	K	V	V	Q	Q	V	H	K	G	N	Q	A	A	D	F	D	T	F	G	K	G	A	W	T	F	E	L	R	V	N	A	V	A	A	L	E	A	A	L	L	D	L	L	G	K	A	L	N	V	P	V
Query Conservation		.	.	.	.	.	.	.								.
Alig confidence		.	.	.	.	.	.	.								.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	L	F	L	A	K	D	F	I	P	V	I	E	K	E	I	A	P	K	L	I	G	R	E	I	T	N	F	K	P	M	A	E	E	F	D	K	M	T	V	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	R	L	H	T	A	I	R	Y	G	I	T	Q	A	I	L	D	A	V	A	K	T	R
Template Known Secondary structure		S															T					T	T		B																	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.																.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.										.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.
Query Sequence		C	E	L	L	G	P	G	K	Q	R	E	.	.	.	.	.	.	.	.	.	A	I	T	V	L	G	Y	L	F	Y	I	G	D	R	T	K	T	D	L	P	Y	V	E	N	T	P	G	N	H	E	W	Y	Q	L	R	H	Q	K	A	M	N	S	E	A	V	V	R	L	A	E	A	S	Q	D	R	Y	G	F	K	D
Query Conservation													.	.	.	.	.	.	.	.	.
Alig confidence							.						.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	T	M	A	.	E	V	I	R	D	E	Y	N	P	G	A	E	I	N	A	V	P	V	F	A	Q	S	G	D	D	R	Y	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	V	D	K	M	I	I	K	E	A	D	V	L	P	H	A	L	I	N	N
Template Known Secondary structure		T	S				.								S	T	T													T	T		T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T		S
Template Predicted Secondary structure							.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.																											180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		203	.	.	.	.	.	.	210	.							.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.							.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.				.	.	260	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.														.											.	.	.	.	.	.																					.				.	.	.
Query SS confidence											.	.	.	.	.	.														.											.	.	.	.	.	.																					.				.	.	.
Query Sequence		F	K	L	K	G	G	V	L	P	.	.	.	.	.	.	G	E	Q	E	I	D	T	V	R	A	L	K	K	.	R	F	P	D	A	R	I	T	V	D	.	.	.	.	.	.	P	N	G	A	W	L	L	D	E	A	I	S	L	C	K	G	L	N	D	V	.	L	T	Y	.	.	.	A	E	D	P	C	G	A	E
Query Conservation											.	.	.	.	.	.														.											.	.	.	.	.	.																					.				.	.	.
Alig confidence											.	.	.	.	.	.														.											.	.	.	.	.	.																					.				.	.	.
Template Conservation
Template Sequence		V	E	E	K	L	G	L	K	G	E	K	L	L	E	Y	V	K	W	L	R	D	R	I	I	K	L	R	V	R	E	D	Y	A	P	I	F	H	I	D	V	Y	G	T	I	G	A	A	F	D	V	D	I	K	A	M	A	D	Y	I	Q	T	L	A	E	A	A	K	P	F	H	L	R	I	E	G	P	M	D	V	E
Template Known Secondary structure								T	T	S																			S	S	T	T										T	T						T	T	T																	T	T	S							S	B			S
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280						.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.																																		.
Query SS confidence																	.	.	.	.	.																																		.
Query Sequence		Q	G	F	S	G	R	E	V	M	A	E	F	R	R	A	.	.	.	.	.	T	G	L	P	V	A	T	N	M	I	A	T	N	W	R	E	M	G	H	A	V	M	L	N	A	V	D	I	P	L	A	D	P	.	H	F	W	T	L	S	G	A	V	R	V	A	Q	L	C	D	D	W	G	L	T	W	G	C	H	S
Query Conservation																	.	.	.	.	.																																		.
Alig confidence																	.	.	.	.	.																																		.
Template Conservation
Template Sequence		D	R	Q	K	Q	M	E	A	M	R	D	L	R	A	E	L	D	G	R	G	V	D	A	E	L	V	A	D	E	W	C	N	T	V	E	D	V	K	F	F	T	D	N	K	A	G	H	M	V	Q	I	K	T	P	D	L	G	G	V	N	N	I	A	D	A	I	M	Y	C	K	A	N	G	M	G	A	Y	C	G	G
Template Known Secondary structure		S																			T									T	T			S										T	T		S	S						T	G	G	G	S	S	T													T	T
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.		.	.	.	.	.	360
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		N	N	H	F	D	I	S	L	A	M	F	T	H	V	G	.	A	A	A	P	G	N
Query Conservation																	.
Alig confidence																	.
Template Conservation
Template Sequence		T	N	E	T	N	R	S	A	E	V	T	T	N	I	G	M	A	C	G	A	R	Q
Template Known Secondary structure																				T		S
Template Predicted Secondary structure
Template SS confidence
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions