Job Description P65298 Confidence 8.27% Date Wed Jan 25 15:21:00 GMT 2012 Rank 87 Aligned Residues 19 % Identity 32% Template c3g9rF_ PDB info PDB header:viral protein Chain: F: PDB Molecule:fusion complex of hiv-1 envelope glycoprotein PDBTitle: structure of the hiv-1 gp41 membrane-proximal ectodomain2 region in a putative prefusion conformation Resolution 2.00 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	T	L	N	A	K	I	A	R	L	E	Q	D	M	K	A	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	E	L	K	S	K	I	K	R	I	E	N	E	I	K	R	I	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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