Job Description P75980 Confidence 2.25% Date Thu Jan 5 12:16:53 GMT 2012 Rank 29 Aligned Residues 71 % Identity 8% Template c1kq8A_ PDB info PDB header:transcription Chain: A: PDB Molecule:hepatocyte nuclear factor 3 forkhead homolog 1; PDBTitle: solution structure of winged helix protein hfh-1 Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.				.	.	.
Predicted Secondary structure																																																																												.	.	.
Query SS confidence																																																																												.	.	.
Query Sequence		V	R	V	L	A	E	S	V	G	M	L	P	C	N	L	Y	H	L	N	G	S	L	K	Q	R	A	T	G	E	R	L	H	K	L	I	S	T	H	P	N	G	Y	M	T	P	Q	E	F	W	E	L	V	V	T	C	L	C	L	R	G	N	F	Y	A	Y	K	V	K	A	F	G	E	V	A	.	.	.	E	L	L
Query Conservation																																																																												.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.																																																				.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.
Template Sequence		I	A	L	I	T	M	A	I	R	D	S	A	G	.	.	.	.	.	.	.	.	.	.	G	R	L	T	L	A	E	I	N	E	Y	L	M	G	K	F	P	F	F	R	G	S	Y	T	G	W	R	N	S	V	R	H	N	L	S	L	N	D	C	F	V	K	V	L	R	D	P	S	R	P	W	G	K	D	N	Y	W
Template Known Secondary structure										T	T	S	S	S	.	.	.	.	.	.	.	.	.	.	S		B														T	T	G	G	G	T		S														T						S	S		S			S	S	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.											.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		129	130	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	D	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	L	N	P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions