Job Description Q9S4X1 Confidence 1.41% Date Thu Jan 5 12:38:24 GMT 2012 Rank 95 Aligned Residues 51 % Identity 8% Template c2iakA_ PDB info PDB header:cell adhesion Chain: A: PDB Molecule:bullous pemphigoid antigen 1, isoform 5; PDBTitle: crystal structure of a protease resistant fragment of the plakin2 domain of bullous pemphigoid antigen1 (bpag1) Resolution 3.00 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	K	K	L	R	A	D	V	A	E	V	A	N	T	M	C	D	L	R	A	R	L	N	D	M	E	H	R	C	R	F	D	S	D	V	L	V	E	R	L	A	R	Q	T	L	Y	R	A	N	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	A	E	L	M	R	E	L	E	Q	K	E	E	S	I	K	A	V	Q	E	I	A	E	Q	L	L	L	E	N	H	P	A	R	L	T	I	E	A	Y	R	A	A	M	Q	T	Q	W	S	W	I	L
Template Known Secondary structure			S	S																									T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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