Return to main results Retrieve Phyre Job Id

Job DescriptionP0AB06
Confidence29.68%DateThu Jan 5 11:14:17 GMT 2012
Rank16Aligned Residues68
% Identity28%Templated1bvua2
SCOP infoAminoacid dehydrogenase-like, N-terminal domain Aminoacid dehydrogenase-like, N-terminal domain Aminoacid dehydrogenases
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   77..80.........90.........100. ........110.........120.........130.........140.........
Predicted Secondary structure 





.......




















Query SS confidence 
























. . . . . . .















































Query Sequence  RANKIKSIDPGLFDQLYRLQGLLGT. . . . . . . RKPVQLISGYRSIDTNNELRARSRGVAKKSYHTKGQAMDFHIEGIALS
Query Conservation 
      


 
 
 
  
    
 .......  

 
 





  
  

  
 
 
  
 

 
 
 

 
 
    
Alig confidence 
























.......











.





.....








........






Template Conservation   
             
  
 
   
  

  
 
      



. 
    .....







 ........ 
 
  
Template Sequence  RAAQYMDISEEALEFLKRPQRIVEVSIPVEMDDGSVKVFTGFRV. QYNWAR. . . . . GPTKGGIRW. . . . . . . . HPEETLS
Template Known Secondary structure  TTS


TTS
S
TTS
.
TT.....SS

........TT

Template Predicted Secondary structure 










.



.....





........




Template SS confidence 















































































   15....20.........30.........40.........50........ .60.... .....70... ......80
 
   150........
Predicted Secondary structure 
Query SS confidence 








Query Sequence  NIRKAALSM
Query Conservation   
   
   
Alig confidence 








Template Conservation 

  

  
Template Sequence  TVKALAAWM
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 








   81........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions