Return to main results Retrieve Phyre Job Id

Job DescriptionP0AB06
Confidence99.91%DateThu Jan 5 11:14:17 GMT 2012
Rank2Aligned Residues91
% Identity25%Templatec1lbuA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:muramoyl-pentapeptide carboxypeptidase; PDBTitle: hydrolase metallo (zn) dd-peptidase
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   86...90.........100.........110.........120.........130.........140.........150.........160...
Predicted Secondary structure 

























..
Query SS confidence 













































































. .
Query Sequence  PGLFDQLYRLQGLLGTRKPVQLISGYRSIDTNNELRARSRGVAKKSYHTKGQAMDFHIEGIALSNIRKAALSMRAGGV. .
Query Conservation 
 
 
 
  
    
   

 
 





  
  

  
 
 
  
 

 
 
 

 
 
     
   
     


..
Alig confidence 














.


















.....





































..
Template Conservation        
   
   
.  

 
 




   
   .....


  
 
  
 
 

 
 
     
   
   
     
Template Sequence  LVTMWKLQAMRHAMG. DKPITVNGGFRSVTCNSNV. . . . . GGASNSRHMYGHAADLGAGSQGFCALAQAARNHGFTEILG
Template Known Secondary structure  TT.S







.....T

TT
GGGGT


TTT
GGGTT
S
Template Predicted Secondary structure 
.










.....























Template SS confidence 















































































   113......120....... ..130.........140...... ...150.........160.........170.........180......
 
   164.....170.........180..
Predicted Secondary structure  .










Query SS confidence  .


















Query Sequence  . GYYPRSNFVHIDTGPARHW
Query Conservation  .
 
  
 




 
  
 
Alig confidence  .


















Template Conservation   
      


      
 
Template Sequence  PGYPGHNDHTHVAGGDGRFW
Template Known Secondary structure  TTSTT
SSS
SSS
Template Predicted Secondary structure 
















Template SS confidence 



















   187..190.........200......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions