Return to main results Retrieve Phyre Job Id

Job DescriptionP39264
Confidence99.90%DateThu Jan 5 11:58:36 GMT 2012
Rank10Aligned Residues131
% Identity26%Templatec3bfwA_
PDB info PDB header:structural protein/structural proteinChain: A: PDB Molecule:protein fimg; PDBTitle: crystal structure of truncated fimg (fimgt) in complex with the donor2 strand peptide of fimf (dsf)
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   40.........50.........60.........70.........80.........90.........100.........110.........
Predicted Secondary structure 








































Query SS confidence 















































































Query Sequence  AETCRIEAGDKQMTVNMGQISSNRFHAVGEDSAPVPFVIHLRECSTVVSERVGVAFHGVADGKNPDVLSVGEGPGIATNI
Query Conservation    

 
        
 

 
                
 
 
  
         
   
                  
 

Alig confidence 






..







































.













.....










Template Conservation 
  
 
 ..     



 
        
       
 
 
  
     .       
      .....       
 

Template Sequence  AKPCTVS. . TTNATVDLGDLYSFSLMSAGAASAWHDVALELTNCPVGTS. RVTASFSGAADSTG. . . . . YYKNQGTAQNI
Template Known Secondary structure 



S..
S









GGGS
STT
B





TT

.

B
TTS.....S

SS
SS
Template Predicted Secondary structure 



..























.






.....









Template SS confidence 















































































   13...... 20.........30.........40.........50......... 60.........70... ......80....
 
   120.........130.........140.........150.........160.........170........
Predicted Secondary structure 






















Query SS confidence 


























































Query Sequence  GVALFDDEGNLVPINRPPANWKRLYSGSTSLHFIAKYRATGRRVTGGIANAQAWFSLTY
Query Conservation 

 
       
  
                 
 
           
   
  

 
 
Alig confidence 


























































Template Conservation 

 
       
                      
        
  
   
  
  
 
Template Sequence  QLELQDDSGNTLNTGATKTVQVDDSSQSAHFPLQVRALTVNGGATQGTIQAVISITYTY
Template Known Secondary structure  TTS
B

TT

BTTTTB
SSS


SS





Template Predicted Secondary structure 





















Template SS confidence 


























































   85....90.........100.........110.........120.........130.........140...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions