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Job DescriptionP39264
Confidence99.79%DateThu Jan 5 11:58:36 GMT 2012
Rank14Aligned Residues119
% Identity19%Templatec2w07B_
PDB info PDB header:cell adhesionChain: B: PDB Molecule:minor pilin subunit papf; PDBTitle: structural determinants of polymerization reactivity of the2 p pilus adaptor subunit papf
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   37..40.........50.........60.........70.........80.........90.........100.........110......
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Query Sequence  VIIAETCRIEAGDKQMTVNMGQISSNRFHAVGEDSAPVPFVIHLRECSTVVSERVGVAFHGVADGKNPDVLSVGEGPGIA
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Template Sequence  NVYIPPCTIN. NGQNIVVDFGNINPEHVDNS. . . RGEVTKTISISCPYGS. . . . LWIKVTGNTMGGGQNNVL. . . . ATNI
Template Known Secondary structure 

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G.GG







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B
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   910........ .20.........30........ .40.........50.... .....60.........70.. ....
 
   117..120.........130.........140.........150.........160 .........170........
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Query Sequence  TNIGVALFDDEGNLVPINRPPANWKRLYSGSTSLHFIAKYRATG. RRVTGGIANAQAWFSLTY
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Template Sequence  THFGIALYQGKGMSTPLT. . . . . . . . . . . LRSTFTFTSVPFRNGSGILNGGDFRTTASMSMIY
Template Known Secondary structure  TTSSSSSSB

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   7980.........90...... ...100.........110.........120.........130
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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