Job Description P41069 Confidence 3.11% Date Thu Jan 5 12:01:26 GMT 2012 Rank 78 Aligned Residues 28 % Identity 14% Template c1o6wA_ PDB info PDB header:nuclear protein Chain: A: PDB Molecule:pre-mrna processing protein prp40; PDBTitle: solution structure of the prp40 ww domain pair of the yeast2 splicing factor prp40 Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		W	I	A	P	Y	I	D	N	Q	D	V	Y	H	Q	P	S	S	V	F	F	V	I	K	P	S	A	W	G	K	P	R	I
Query Conservation
Alig confidence					.										.	.	.
Template Conservation					.										.	.	.
Template Sequence		W	K	A	.	A	K	T	A	D	G	K	V	Y	.	.	.	Y	Y	N	P	T	T	R	E	T	S	W	T	I	P	A	F
Template Known Secondary structure					.				T	T					.	.	.				T	T	T	T				S	S
Template Predicted Secondary structure					.										.	.	.
Template SS confidence
		45	.	.		.	.	50	.	.	.	.	.	.				.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions