Return to main results Retrieve Phyre Job Id

Job DescriptionP09148
Confidence99.94%DateThu Jan 5 11:01:58 GMT 2012
Rank7Aligned Residues129
% Identity19%Templatec3lb5B_
PDB info PDB header:cell cycleChain: B: PDB Molecule:hit-like protein involved in cell-cycle regulation; PDBTitle: crystal structure of hit-like protein involved in cell-cycle2 regulation from bartonella henselae with unknown ligand
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   193......200.........210.........220.........230.........240.........250.........260.........270..
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  QKSPMLVDYVQRELADGSRTVVETEHWLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKKLTSRYDNLFQC
Query Conservation   
 






  
     


 

    

 
 

  
 

 



 
      
   
   

  
  
   
      
Alig confidence 














..






























































Template Conservation     
 

 
   
  ..  

 
 
  
      
   

 




 
      
   
   
      
   
      
Template Sequence  DNNNIFAKLIRNEIP. . SVRVYEDDDVIAFMDIMPQAPGHTLVIPKKGSRNLLDADTETLFPVIKAVQKIAKAVKKAFQA
Template Known Secondary structure 
TTSTTSS
..


SS
SS
SSTT
SS

SSSSSS
TT
Template Predicted Secondary structure 








..



















Template SS confidence 















































































   6...10.........20 .........30.........40.........50.........60.........70.........80...
 
   273......280.........290.........300.........310.........320.........330.......
Predicted Secondary structure 



































Query SS confidence 
































































Query Sequence  SFPYSMGWHGAPFNGEENQHWQLHAHFYPPLLRSATVRKFMVGYEMLAETQRDLTAEQAAERLRA
Query Conservation     

   
  
         



 
 

  
        

 

    
    

 

  


Alig confidence 
.















..









..













.........









Template Conservation   .                .. 


 




..              ......... 

 
  

 
Template Sequence  D. GITVMQFNEAASQQTV. . YHLHFHIIPR. . MEGIENNIITPTEI. . . . . . . . . LEENAKKIRA
Template Known Secondary structure  S.

SGGGT

S..SS

..
TT







.........
Template Predicted Secondary structure 
.









..
..











.........
Template SS confidence 
































































   84 .....90.........100 .........110 .........120.... .....130....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions