Return to main results Retrieve Phyre Job Id

Job DescriptionP09148
Confidence98.60%DateThu Jan 5 11:01:58 GMT 2012
Rank32Aligned Residues130
% Identity18%Templatec3bl9B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:scavenger mrna-decapping enzyme dcps; PDBTitle: synthetic gene encoded dcps bound to inhibitor dg157493
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   198.200.........210........ .220...... ...230.........240 .........250.........260........
Predicted Secondary structure 





....


....








.




Query SS confidence 




















. . . .







. . . .













.



























Query Sequence  LVDYVQRELADGSRTVVETEH. . . . WLAVVPYW. . . . AAWPFETLLLPKAH. VLRITDLTDAQRSDLALALKKLTSRYDN
Query Conservation 




  
     


 

  ....  

 
 
....
  
 

 



 
.      
   
   

  
  
   
  
Alig confidence 




















....







....













.



























Template Conservation 

 


    
 


   
 
   






 


      





     
 




   





 
       
  
Template Sequence  WVYNILDKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILHQGQEAILQ
Template Known Secondary structure  TTSSSGGG



TTT

TT

SS
STT
SSS


SGGG

GGG
Template Predicted Secondary structure 




























Template SS confidence 















































































   175....180.........190.........200.........210.........220.........230.........240.........250....
 
   269270. ........280.........290.........300.........310....... ..320.........330.........340......
Predicted Secondary structure 
.

























.















Query SS confidence 


.













































.




























Query Sequence  LFQ. CSFPYSMGWHGAPFNGEENQHWQLHAHFYPPLLRSATVRKFMVGYE. MLAETQRDLTAEQAAERLRAVSDIHFRES
Query Conservation     .    

   
  
         



 
 

  
        

 
.
    
    

 

  


         
Alig confidence 


.












......










............



.


















.








Template Conservation     
     





 
......
  







............    


   


 





 


.     
   
Template Sequence  RYRMKGDHLRVYLHYLP. . . . . . SYYHLHVHFTA. . . . . . . . . . . . LGFEAPGSGVERAHLLAEVIENLE. CDPRHYQQR
Template Known Secondary structure 


GGGSS
......SSSS
............TT


TT
STTT.
TTS
Template Predicted Secondary structure 






......


............










.


Template SS confidence 















































































   255....260.........270. ........280.. .......290.........300...... ...310.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions