Return to main results Retrieve Phyre Job Id

Job DescriptionP17115
Confidence58.69%DateThu Jan 5 11:35:59 GMT 2012
Rank223Aligned Residues101
% Identity13%Templatec3t6kB_
PDB info PDB header:signaling proteinChain: B: PDB Molecule:response regulator receiver; PDBTitle: crystal structure of a hypothetical response regulator (caur_3799)2 from chloroflexus aurantiacus j-10-fl at 1.86 a resolution
Resolution1.86 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41........50.........60.........70.........80.........90.........100.........110..... .
Predicted Secondary structure 
























....
Query SS confidence 










































































. . . .
Query Sequence  CEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDK. . . . S
Query Conservation     

 
 
 
 
  

      
   
                  
   



 

 

 
 
       

  ....
Alig confidence 







..



















































..










....
Template Conservation 
   



..

       
   
   
  
        
         





  
    ..
      

       
Template Sequence  KPHTLLIV. . DDDDTVAEXLELVLRGAGYEVRRAASGEEALQQIYKNLPDALICDVLLPGID. . GYTLCKRVRQHPLTKT
Template Known Secondary structure 


..
S
TT
SSS

SS

SSS
..SGGGTT
Template Predicted Secondary structure 


..





















..





Template SS confidence 















































































   2....... 10.........20.........30.........40.........50.........60. ........70.......
 
   117..120.........130... ......140.....
Predicted Secondary structure 







.....






Query SS confidence 
















. . . . .











Query Sequence  IALLAMTGKPTSPLGLA. . . . . AKAVLDISVERE
Query Conservation    

 

    
 

  .....

  
      
Alig confidence 
















.....











Template Conservation    

  
              
    
 

    
Template Sequence  LPILXLTAQGDISAKIAGFEAGANDYLAKPFEPQ
Template Known Secondary structure 


TT
T
STT

Template Predicted Secondary structure 


















Template SS confidence 

































   78.80.........90.........100.........110.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions