Job Description P17115 Confidence 99.73% Date Thu Jan 5 11:35:59 GMT 2012 Rank 81 Aligned Residues 118 % Identity 16% Template c3ocmB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:putative membrane protein; PDBTitle: the crystal structure of a domain from a possible membrane protein of2 bordetella parapertussis Resolution 1.80 Å

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		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		N	K	V	H	H	L	M	R	R	D	D	A	I	P	Q	V	A	L	T	A	S	V	M	D	A	M	L	E	L	S	R	T	G	L	G	L	V	A	V	C	D	A	Q	.	Q	Q	V	Q	G	V	F	T	D	G	D	L	R	R	W	L	V	G	G	G	A	L	T	T	P	V	N	E	A	M	T	V	G	G	T	T
Query Conservation																																													.
Alig confidence																																													.																					.	.	.	.
Template Conservation																																																																		.	.	.	.
Template Sequence		R	S	I	R	S	I	X	T	P	R	T	D	V	S	W	V	N	I	D	D	D	A	A	T	I	R	Q	Q	L	T	A	A	P	H	S	F	F	P	V	C	R	G	S	L	D	E	V	V	G	I	G	R	A	K	D	L	V	A	D	L	I	T	E	G	.	.	.	.	R	V	R	R	N	R	L	R	D	P	I	I
Template Known Secondary structure		S						S			G	G	G						T	T	S												S			S						S	S	S	T	T	S																		S	.	.	.	.	S			G	G	G	S	B
Template Predicted Secondary structure																																																																		.	.	.	.
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.					.	.	.	.	400	.	.	.	.	.	.	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	S	Q	S	R	A	I	D	A	K	E	I	L	M	K	R	K	I	T	A	A	P	V	V	D	E	N	G	K	L	T	G	A	I	N	L	Q	D	F	Y	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	H	E	S	I	G	I	L	R	L	X	D	T	L	K	R	S	R	G	Q	L	V	L	V	A	D	E	F	G	A	I	E	G	L	V	T	P	I	D	V	F	E	A
Template Known Secondary structure				G	G	G													T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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