Job Description P17115 Confidence 99.76% Date Thu Jan 5 11:35:59 GMT 2012 Rank 62 Aligned Residues 119 % Identity 18% Template c3lv9A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:putative transporter; PDBTitle: crystal structure of cbs domain of a putative transporter from2 clostridium difficile 630 Resolution 2.40 Å

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		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		N	K	V	H	H	L	M	R	R	D	D	A	I	P	Q	V	A	L	T	A	S	V	M	D	A	M	L	E	L	S	R	T	G	L	G	L	V	A	V	C	D	.	A	Q	Q	Q	V	Q	G	V	F	T	D	G	D	L	R	R	W	L	V	G	G	G	A	L	T	T	P	V	N	E	A	M	T	V	G	G	T	T
Query Conservation																																											.
Alig confidence																																											.																											.	.	.
Template Conservation																																																																						.	.	.
Template Sequence		K	K	I	R	E	I	X	V	P	R	T	D	X	V	C	I	Y	E	S	D	S	E	E	K	I	L	A	I	L	K	E	E	G	V	T	R	Y	P	V	C	R	K	N	K	D	D	I	L	G	F	V	H	I	R	D	L	Y	N	Q	K	I	N	E	N	K	I	E	L	.	.	.	E	E	I	L	R	D	I	I	Y
Template Known Secondary structure			B	G	G	G	T	S			T	T	T						T	T													S			S						S	S	S	T	T	S																		S				G	.	.	.	G	G	T		B
Template Predicted Secondary structure																																																																						.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.				.	.	90	.	.	.	.	.	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	S	Q	S	R	A	I	D	A	K	E	I	L	M	K	R	K	I	T	A	A	P	V	V	D	E	N	G	K	L	T	G	A	I	N	L	Q	D	F	Y	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S	E	N	L	T	I	D	K	A	L	E	R	I	R	K	E	K	L	Q	L	A	I	V	V	D	E	Y	G	G	T	S	G	V	V	T	I	E	D	I	L	E	E
Template Known Secondary structure				T	T	S	B												T		S							T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions