Job Description P17115 Confidence 58.65% Date Thu Jan 5 11:35:59 GMT 2012 Rank 224 Aligned Residues 84 % Identity 19% Template c3lk7A_ PDB info PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramoylalanine--d-glutamate ligase; PDBTitle: the crystal structure of udp-n-acetylmuramoylalanine-d-2 glutamate (murd) ligase from streptococcus agalactiae to3 1.5a Resolution 1.50 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.																			.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Query Sequence		C	E	G	K	V	V	V	S	G	I	G	K	S	G	H	I	G	K	K	I	A	A	T	L	A	S	T	G	T	P	A	F	F	V	H	P	A	E	A	L	H	G	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	M	I	E	S	R	D	V	M	L	F	I	S	.	.	Y	S	G
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Alig confidence																			.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation																			.	.	.
Template Sequence		E	N	K	K	V	L	V	L	G	L	A	R	S	G	E	A	A	.	.	.	A	R	L	L	A	K	L	G	A	I	V	T	V	N	D	G	K	P	F	D	E	N	P	T	A	Q	S	L	L	E	E	G	I	K	V	V	C	G	S	H	P	L	E	L	L	D	E	D	F	C	Y	X	I	K	N	P	G	I	P	Y
Template Known Secondary structure		T	T									T	T	T					.	.	.							T	T								S	S		G	G	G										T	T						S				G	G	G	G	G	S									T	T	S		T
Template Predicted Secondary structure																			.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.												.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	A	K	E	L	D	L	I	I	P	R	.	.	.	.	.	.	.	.	.	.	.	L	E	D	K	S	I	A	L	L	A	M	T	G	K	P	T
Query Conservation													.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	N	P	X	V	K	K	A	L	E	K	Q	I	P	V	L	T	E	V	E	L	A	Y	L	V	S	E	S	Q	L	I	G	I	T	G	S	N	G
Template Known Secondary structure		T	S									T	T																S								S	S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions