Job Description P17115 Confidence 99.81% Date Thu Jan 5 11:35:59 GMT 2012 Rank 37 Aligned Residues 118 % Identity 17% Template c3lhhA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:cbs domain protein; PDBTitle: the crystal structure of cbs domain protein from shewanella2 oneidensis mr-1. Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		K	V	H	H	L	M	R	R	D	D	A	I	P	Q	V	A	L	T	A	S	V	M	D	A	M	L	E	L	S	R	T	G	L	G	L	V	A	V	C	D	A	Q	.	Q	Q	V	Q	G	V	F	T	D	G	D	L	R	R	W	L	V	G	G	G	A	L	T	T	P	V	N	E	A	M	T	V	G	G	T	T	L
Query Conservation																																												.
Alig confidence																																												.																					.	.	.
Template Conservation																																																																	.	.	.
Template Sequence		T	I	S	S	L	X	V	P	R	S	D	I	V	F	L	D	L	N	L	P	L	D	A	N	L	R	T	V	X	Q	S	P	H	S	R	F	P	V	C	R	N	N	V	D	D	X	V	G	I	I	S	A	K	Q	L	L	S	E	S	I	A	G	E	.	.	.	R	L	E	L	V	D	L	V	K	N	C	N	F	V
Template Known Secondary structure			T	T	T	T	S			G	G	G						T	T	S											T				S						S	S	S	T	T	S																T	T		.	.	.				G	G	G	G		B
Template Predicted Secondary structure																																																																	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.				.	.	.	.	.	.	110	.	.	.	.	.	.	.
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	Q	S	R	A	I	D	A	K	E	I	L	M	K	R	K	I	T	A	A	P	V	V	D	E	N	G	K	L	T	G	A	I	N	L	Q	D	F	Y	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	N	S	L	S	G	X	E	L	L	E	H	F	R	T	T	G	S	Q	X	V	F	V	V	D	E	Y	G	D	L	K	G	L	V	T	L	Q	D	X	X	D	A
Template Known Secondary structure			T	T														T		S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions