Job Description P17115 Confidence 99.80% Date Thu Jan 5 11:35:59 GMT 2012 Rank 41 Aligned Residues 120 % Identity 15% Template c3i8nB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein vp2912; PDBTitle: a domain of a conserved functionally known protein from2 vibrio parahaemolyticus rimd 2210633. Resolution 2.15 Å

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		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		N	K	V	H	H	L	M	R	R	D	D	A	I	P	Q	V	A	L	T	A	S	V	M	D	A	M	L	E	L	S	R	T	G	L	G	L	V	A	V	C	D	.	A	Q	Q	Q	V	Q	G	V	F	T	D	G	D	L	R	R	W	L	V	G	G	G	A	L	T	T	P	V	N	E	A	M	T	V	G	G	T	T
Query Conservation																																											.
Alig confidence																																											.																											.	.
Template Conservation																																																																						.	.
Template Sequence		V	P	V	T	Q	V	X	T	P	R	P	V	V	F	R	V	D	A	T	X	T	I	N	E	F	L	D	K	H	K	D	T	P	F	S	R	P	L	V	Y	S	E	Q	K	D	N	I	I	G	F	V	H	R	L	E	L	F	K	X	Q	Q	S	G	S	G	Q	K	Q	.	.	L	G	A	V	X	R	P	I	Q	V
Template Known Secondary structure			B					S			G	G	G						T	T	S	B												T	T							S	S	S	T	T																	T	T	T	T	T	S	B	.	.	G	G	G	G		B
Template Predicted Secondary structure																																																																						.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.			.	260	.	.	.	.	.	.	.	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	S	Q	S	R	A	I	D	A	K	E	I	L	M	K	R	K	I	T	A	A	P	V	V	D	E	N	G	K	L	T	G	A	I	N	L	Q	D	F	Y	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	N	N	T	A	L	P	K	V	F	D	Q	X	X	T	H	R	L	Q	L	A	L	V	V	D	E	Y	G	T	V	L	G	L	V	T	L	E	D	I	F	E	H
Template Known Secondary structure				T	T	S	B											T	T		S							T	T
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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