Job Description P17115 Confidence 99.78% Date Thu Jan 5 11:35:59 GMT 2012 Rank 50 Aligned Residues 127 % Identity 17% Template c3ctuB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:cbs domain protein; PDBTitle: crystal structure of cbs domain protein from streptococcus2 pneumoniae tigr4 Resolution 2.81 Å

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		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260						.	.	.	.
Predicted Secondary structure																																																																									.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.
Query Sequence		A	L	G	A	R	L	L	N	K	V	H	H	L	M	R	R	D	D	A	I	P	Q	V	A	L	T	A	S	V	M	D	A	M	L	E	L	S	R	T	G	L	G	L	V	A	V	C	D	A	Q	Q	Q	V	Q	G	V	F	T	D	G	D	L	R	R	W	L	V	G	G	G	A	.	.	.	.	.	L	T	T	P
Query Conservation																																																																									.	.	.	.	.
Alig confidence																																																																									.	.	.	.	.
Template Conservation
Template Sequence		E	F	E	T	F	L	L	G	Q	E	E	T	F	L	T	P	A	K	N	L	A	V	L	I	D	T	H	N	A	D	H	A	T	L	L	L	S	Q	X	T	Y	T	R	V	P	V	V	T	D	E	K	Q	F	V	G	T	I	G	L	R	D	I	X	A	Y	Q	X	E	H	D	L	S	Q	E	I	X	A	D	T	D
Template Known Secondary structure									T	T								G	G	G	S					T	T	S	B									T	T	S	S		S							T	T		B																		T							T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	E	A	M	T	V	G	G	T	T	L	Q	S	Q	S	R	A	I	D	A	K	E	I	L	M	K	R	K	I	T	A	A	P	V	V	D	E	N	G	K	L	T	G	A	I	N	L	Q	D	F	Y	Q	A
Query Conservation
Alig confidence																																.	.
Template Conservation																																.	.
Template Sequence		I	V	H	X	T	K	T	D	V	A	V	V	S	P	D	F	T	I	T	E	V	L	H	K	L	V	D	E	S	F	.	.	L	P	V	V	D	A	E	G	I	F	Q	G	I	I	T	R	K	S	I	L	K	A
Template Known Secondary structure		G	G	G	G		B						B		T	T														S		.	.						T	T	S	B
Template Predicted Secondary structure																																.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.			.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions