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Job DescriptionP17115
Confidence37.19%DateThu Jan 5 11:35:59 GMT 2012
Rank357Aligned Residues110
% Identity9%Templatec3a11D_
PDB info PDB header:isomeraseChain: D: PDB Molecule:translation initiation factor eif-2b, delta PDBTitle: crystal structure of ribose-1,5-bisphosphate isomerase from2 thermococcus kodakaraensis kod1
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  LNAGRQTLMLELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEALHGDLG
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Template Sequence  LEQLRFVIINAAKEFIHNSEKALERIGEFGAKRIEDGDVIMTHCHS. . . . . . . . . . . . . . . . . . . . . . . KAAISVMKTAW
Template Known Secondary structure  TTT

TT

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   90.........100.........110.........120.........130..... ....140......
 
   86...90.........100.........110.........120.........130.........
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Query Sequence  MIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLD
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Template Sequence  EQGKDIKVIVTETRPKWQG. KITAKELASYGIPVIYVVDSAARHYMKMTDKVVM
Template Known Secondary structure  TT




TTTT.TT


GGGTTTTGGG
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   147..150.........160..... ....170.........180.........190.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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