Job Description P17115 Confidence 99.90% Date Thu Jan 5 11:35:59 GMT 2012 Rank 9 Aligned Residues 162 % Identity 19% Template c2yvaB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:dnaa initiator-associating protein diaa; PDBTitle: crystal structure of escherichia coli diaa Resolution 1.85 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.				.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.							.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																				.	.	.																												.	.	.	.	.	.
Query SS confidence																																				.	.	.																												.	.	.	.	.	.
Query Sequence		L	L	N	A	G	R	Q	T	L	M	L	E	L	Q	E	A	S	R	L	P	E	R	L	G	D	D	F	V	R	A	A	N	I	I	.	.	.	L	H	C	E	G	K	V	V	V	S	G	I	G	K	S	G	H	I	G	K	K	I	A	A	T	L	A	.	.	.	.	.	.	S	T	G	T	P	A	F	F	V	H
Query Conservation																																				.	.	.																												.	.	.	.	.	.
Alig confidence																																				.	.	.																												.	.	.	.	.	.
Template Conservation
Template Sequence		M	Q	E	R	I	K	A	C	F	T	E	S	I	Q	T	Q	I	A	A	A	E	A	L	P	D	A	I	S	R	A	A	M	T	L	V	Q	S	L	L	N	G	N	K	I	L	C	C	G	N	G	T	S	A	A	N	A	Q	H	F	A	A	S	M	I	N	R	F	E	T	E	R	P	S	L	P	A	I	A	L	N
Template Known Secondary structure																								S																	T	T								S	T															T		S	S	S										S	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		76	.	.	.	80	.	.	.	.																.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.				.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.
Query Sequence		P	A	E	A	L	H	G	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	M	I	E	S	R	D	V	M	L	F	I	S	Y	S	G	G	A	K	E	L	D	L	I	I	P	R	L	E	D	K	S	I	A	L	L	A	M	T	G	K	P	T	S	P	L	G	L	A	.	.	.	A	K	A	V
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.
Template Conservation
Template Sequence		T	D	N	V	V	L	T	A	I	A	N	D	R	L	H	D	E	V	Y	A	K	Q	V	R	A	L	G	H	A	G	D	V	L	L	A	I	S	T	R	G	N	S	R	D	I	V	K	A	V	E	A	A	V	T	R	D	M	T	I	V	A	L	T	G	Y	D	G	G	E	L	A	G	L	L	G	P	Q	D	V	E
Template Known Secondary structure											T	T	S	T	T	G	G	G	T	T										T	T								S	S	S															T	T									T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	I	S	V	E	R	E	A	C	P	M	H	L	A	P	T	S	S	T	V	N	T	L	M	M	G	D	A	L	A	M	A	V	M	Q	A
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.
Template Sequence		I	R	I	P	S	H	R	.	.	.	.	.	.	.	.	S	A	R	I	Q	E	M	H	M	L	T	V	N	C	L	C	D	L	I	D	N	T
Template Known Secondary structure					S		S		.	.	.	.	.	.	.	.
Template Predicted Secondary structure									.	.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.									.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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