Job Description P17115 Confidence 99.74% Date Thu Jan 5 11:35:59 GMT 2012 Rank 74 Aligned Residues 137 % Identity 17% Template c2v8qE_ PDB info PDB header:transferase Chain: E: PDB Molecule:5'-amp-activated protein kinase subunit gamma-1; PDBTitle: crystal structure of the regulatory fragment of mammalian2 ampk in complexes with amp Resolution 2.10 Å

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		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		F	A	R	S	H	P	A	G	A	L	G	A	R	L	L	N	K	V	H	H	L	M	R	R	D	D	A	I	P	Q	V	A	L	T	A	S	V	M	D	A	M	L	E	L	S	R	T	G	L	G	L	V	A	V	C	D	A	Q	Q	Q	V	Q	G	V	F	T	D	G	D	L	R	R	W	L	V	G	G	G	.	.
Query Conservation																																																																																.	.
Alig confidence																																																																																.	.
Template Conservation
Template Sequence		K	L	F	I	T	E	F	P	K	P	E	F	M	S	K	S	L	E	E	L	Q	I	G	T	Y	A	N	I	A	M	V	R	T	T	T	P	V	Y	V	A	L	G	I	F	V	Q	H	R	V	S	A	L	P	V	V	D	E	K	G	R	V	V	D	I	Y	S	K	F	D	V	I	N	L	A	A	E	K	T	Y	N
Template Known Secondary structure					S		S	S	S			G	G	G	G	S	B					T		S	B		S	S						T	T		B														S							T	T	S	B							G	G	G	T	G	G	G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		260	.	.	.	.	.	.	.	.	.	270							.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.
Query Sequence		A	L	T	T	P	V	N	E	A	M	T	.	.	.	.	.	.	V	G	G	T	T	L	Q	S	Q	S	R	A	I	D	A	K	E	I	L	M	K	R	K	I	T	A	A	P	V	V	D	E	N	G	K	L	T	G	A	I	N	L	Q	D	F	Y	Q	A
Query Conservation													.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.
Template Conservation
Template Sequence		N	L	D	V	S	V	T	K	A	L	Q	H	R	S	H	Y	F	E	G	V	L	K	C	Y	L	H	E	T	L	E	A	I	I	N	R	L	V	E	A	E	V	H	R	L	V	V	V	D	E	H	D	V	V	K	G	I	V	S	L	S	D	I	L	Q	A
Template Known Secondary structure				S	S	B					G	G	G			S				S						T	T	S	B												T		S							T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions