Job Description P17115 Confidence 27.27% Date Thu Jan 5 11:35:59 GMT 2012 Rank 451 Aligned Residues 89 % Identity 18% Template c2qzjC_ PDB info PDB header:transcription Chain: C: PDB Molecule:two-component response regulator; PDBTitle: crystal structure of a two-component response regulator from2 clostridium difficile Resolution 2.89 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		E	G	K	V	V	V	S	G	I	G	K	S	G	H	I	G	K	K	I	A	A	T	L	A	S	T	G	T	P	A	F	F	V	H	P	A	E	A	L	H	G	D	L	G	M	I	E	S	R	D	V	M	L	F	I	S	Y	S	G	G	A	.	K	E	L	D	L	I	I	P	R	L	E	D	K	S	I	A	L	L
Query Conservation																																																															.
Alig confidence								.	.																																																						.										.	.
Template Conservation								.	.																																																																.	.
Template Sequence		Q	T	K	I	L	I	.	.	I	D	G	D	K	D	N	C	Q	K	L	K	G	F	L	E	E	K	G	I	S	I	D	L	A	Y	N	C	E	E	A	I	G	K	I	F	S	N	K	Y	D	L	I	F	L	E	I	I	L	S	D	G	D	G	W	T	L	C	K	K	I	R	N	.	.	V	T	T	C	P	I	V
Template Known Secondary structure								.	.			S															T	T								S										T				S						S			T	T													.	.				S
Template Predicted Secondary structure								.	.																																																																.	.
Template SS confidence
		4	.	.	.	.	.			10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	T	G	K	P	T	S	P	L	G	L	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	X	T	Y	I	N	E	D	Q	S	I	L	N	A
Template Known Secondary structure					S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions