Job Description P17115 Confidence 99.78% Date Thu Jan 5 11:35:59 GMT 2012 Rank 51 Aligned Residues 137 % Identity 20% Template c2qlvF_ PDB info PDB header:transferase/protein binding Chain: F: PDB Molecule:nuclear protein snf4; PDBTitle: crystal structure of the heterotrimer core of the s.2 cerevisiae ampk homolog snf1 Resolution 2.60 Å

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		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	D	F	A	R	S	H	P	A	G	A	L	G	A	R	L	L	N	K	V	H	H	L	M	R	R	D	D	A	I	P	Q	V	A	L	T	A	S	V	M	D	A	M	L	E	L	S	R	T	G	L	G	L	V	A	V	C	D	A	Q	Q	Q	V	Q	G	V	F	T	D	G	D	L	R	R	W	L	V	G	G
Query Conservation
Alig confidence																			.										.	.
Template Conservation																			.										.	.
Template Sequence		K	F	V	A	L	N	C	R	E	T	H	F	L	K	I	P	I	.	G	D	L	N	I	I	T	Q	D	.	.	N	M	K	S	C	Q	M	T	T	P	V	I	D	V	I	Q	M	L	T	Q	G	R	V	S	S	V	P	I	I	D	E	N	G	Y	L	I	N	V	Y	E	A	Y	D	V	L	G	L	I	K	G	G
Template Known Secondary structure									G	G	G	G	G			S	B	G	.	G	G	T	T	T	S	B		S	.	.	S				B		T	T	S	B											T	T		S							T	T		B							T	T							T	T	S
Template Predicted Secondary structure																			.										.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.			.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		259	260			.	.	.	.	.	.	.	.	.	270							.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.											.	.	.	.	.	.
Query SS confidence				.	.											.	.	.	.	.	.
Query Sequence		G	A	.	.	L	T	T	P	V	N	E	A	M	T	.	.	.	.	.	.	V	G	G	T	T	L	Q	S	Q	S	R	A	I	D	A	K	E	I	L	M	K	R	K	I	T	A	A	P	V	V	D	E	N	G	K	L	T	G	A	I	N	L	Q	D	F	Y	Q	A
Query Conservation				.	.											.	.	.	.	.	.
Alig confidence				.	.											.	.	.	.	.	.
Template Conservation
Template Sequence		I	Y	N	D	L	S	L	S	V	G	E	A	L	M	R	R	S	D	D	F	E	G	V	Y	T	C	T	K	N	D	K	L	S	T	I	M	D	N	I	R	K	A	R	V	H	R	F	F	V	V	D	D	V	G	R	L	V	G	V	L	T	L	S	D	I	L	K	Y
Template Known Secondary structure				G	G	G	G	S	B					T	T	S	S		T	T									T	T		B											S										S	S	S	B
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions