Return to main results Retrieve Phyre Job Id

Job DescriptionP17115
Confidence25.45%DateThu Jan 5 11:35:59 GMT 2012
Rank475Aligned Residues100
% Identity11%Templatec2gwrA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:dna-binding response regulator mtra; PDBTitle: crystal structure of the response regulator protein mtra from2 mycobacterium tuberculosis
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   42.......50.........60.........70.........80.........90.........100.........110..... ....120
Predicted Secondary structure 























.


Query SS confidence 









































































.




Query Sequence  EGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDK. SIALL
Query Conservation    

 
 
 
 
  

      
   
                  
   



 

 

 
 
       

  .
  

Alig confidence 






..




















































..









.




Template Conservation 
 




..

       
   
   
  
       


        






 

   
..      

      

Template Sequence  RQRILVV. . DDDASLAEXLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLXLPGXNG. . IDVCRVLRADSGVPIV
Template Known Secondary structure 

..
S
TT


GGG

SSS
SSS
..TT



Template Predicted Secondary structure 

..




















..










Template SS confidence 















































































   5....10. ........20.........30.........40.........50.........60.... .....70.........80
 
   121........ 130.........140.....
Predicted Secondary structure 





.....






Query SS confidence 








. . . . .















Query Sequence  AMTGKPTSP. . . . . LGLAAKAVLDISVERE
Query Conservation   

    
 .....

  

  
      
Alig confidence 








.....















Template Conservation    
          
   
   

 

    
Template Sequence  XLTAKTDTVDVVLGLESGADDYIXKPFKPK
Template Known Secondary structure  TT

S
TT

S

Template Predicted Secondary structure 



















Template SS confidence 





























   81........90.........100.........110
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions