Job Description P17115 Confidence 63.02% Date Thu Jan 5 11:35:59 GMT 2012 Rank 202 Aligned Residues 83 % Identity 24% Template c2f00A_ PDB info PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate--l-alanine ligase; PDBTitle: escherichia coli murc Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.																.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	K	V	V	V	S	G	I	G	K	S	G	H	I	G	K	K	I	A	A	T	L	A	S	T	G	T	P	A	F	F	V	H	P	A	E	A	L	H	G	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	M	I	E	S	R	D	V	M	L	F	I	S	Y	S	G	G	A	K	E	L	D	L
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.
Template Sequence		R	H	I	H	F	V	G	I	G	G	A	G	X	G	G	I	.	.	A	E	V	L	A	N	E	G	Y	Q	I	S	G	S	D	L	A	P	N	P	V	T	Q	Q	L	X	N	L	G	A	T	I	Y	F	N	H	R	P	E	N	V	R	D	A	S	V	V	V	V	S	S	A	I	S	A	D	N	P	E	I	V	A
Template Known Secondary structure								T	T	T	S	T	T					.	.							T	T								S	S											T	T					S	S			G	G	G	G	T	T		S						T	T			T	T
Template Predicted Secondary structure																		.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		108	.	110											.	.	.	.			.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.					.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.					.	.
Query Sequence		I	I	P	.	.	.	.	.	.	.	.	.	.	R	L	E	D	.	.	K	S	I	A	L	L	A	M	T	G	K	P	T
Query Conservation					.	.	.	.	.	.	.	.	.	.					.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.					.	.
Template Conservation
Template Sequence		A	H	E	A	R	I	P	V	I	R	R	A	E	X	L	A	E	L	X	R	F	R	H	G	I	A	I	A	G	T	H	G
Template Known Secondary structure					T	T															T	T	S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions