Job Description P17115 Confidence 99.76% Date Thu Jan 5 11:35:59 GMT 2012 Rank 66 Aligned Residues 120 % Identity 19% Template c2d4zB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:chloride channel protein; PDBTitle: crystal structure of the cytoplasmic domain of the chloride channel2 clc-0 Resolution 3.10 Å

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		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.			.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	N	K	V	H	H	L	M	R	R	D	D	A	I	P	Q	V	A	L	T	A	S	V	M	D	A	M	L	E	L	S	R	T	G	L	G	L	V	A	V	C	D	.	.	A	Q	Q	Q	V	Q	G	V	F	T	D	G	D	L	R	R	W	L	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																												.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.																															.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.
Template Sequence		N	I	Q	V	G	D	I	M	V	R	.	.	D	V	T	S	I	A	S	T	S	T	Y	G	D	L	L	H	V	L	R	Q	T	K	L	K	F	F	P	F	V	D	T	P	D	T	N	T	L	L	G	S	I	D	R	T	E	V	E	G	L	L	Q	R	R	I	S	A	Y	R	R	Q	P	K	Q	K	G	T	G	Q
Template Known Secondary structure				B	T	T	S	S	S	B	S	.	.	S						T	T		B										T				S						S		T	T	T		B																				T	T	S										B
Template Predicted Secondary structure												.	.
Template SS confidence
		536	.	.	.	540	.	.	.	.	.			.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.
																							258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	A	L	T	T	P	V	N	E	A	M	T	V	G	G	T	T	L	Q	S	Q	S	R	A	I	D	A	K	E	I	L	M	K	R	K	I	T	A	A	P	V	V	D	E	N	G	K	L	T	G	A	I	N	L	Q	D	F	Y
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.
Template Conservation																																																																				.
Template Sequence		V	A	S	R	F	E	E	M	L	T	L	E	E	I	Y	R	W	E	Q	R	E	K	N	V	V	V	N	F	E	T	C	R	I	D	Q	S	P	F	Q	L	V	E	G	T	S	L	Q	K	T	H	T	L	F	S	L	L	G	L	D	R	A	Y	V	T	S	M	.	G	K	L	V	G	V	V	A	L	A	E	I	Q
Template Known Secondary structure					T	T	S	S			B												T	T	S	B			T	T	S	S						S					T	T		B												T		S							T	.	T
Template Predicted Secondary structure																																																																				.
Template SS confidence
		687	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.		.	.	.	.	.	.	.	760	.	.	.	.	.
		317	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		766	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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