Return to main results Retrieve Phyre Job Id

Job DescriptionP17115
Confidence44.23%DateThu Jan 5 11:35:59 GMT 2012
Rank301Aligned Residues78
% Identity15%Templatec1u9yD_
PDB info PDB header:transferaseChain: D: PDB Molecule:ribose-phosphate pyrophosphokinase; PDBTitle: crystal structure of phosphoribosyl diphosphate synthase2 from methanocaldococcus jannaschii
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   45....50.........60...... ...70.........80.........90.........100... ......110.........
Predicted Secondary structure 


..
















...



Query SS confidence 





















. .




































. . .















Query Sequence  VVVSGIGKSGHIGKKIAATLAS. . TGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAK. . . ELDLIIPRLEDKSIAL
Query Conservation 
 
 
 
 
  

      
  .. 
                  
   



 

 

 
 ...
       

  
  
Alig confidence 





















..




































...















Template Conservation 
 
 


    

  

  

  
       
 


  
 
   
 
 

 



    

 
 


    


   
 
Template Sequence  MIVVSGSQSQNLAFKVAKLLNTKLTRVEYKRFPDNEIYVRIVDEINDDEAVIINTQKNQNDAIVETILLCDALRDEGVKK
Template Known Secondary structure 

TT
TT



TT


S


SS


SSTTT

Template Predicted Secondary structure 






























Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   120..
Predicted Secondary structure 
Query SS confidence 


Query Sequence  LAM
Query Conservation 
 
Alig confidence 


Template Conservation 
  
Template Sequence  ITL
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 


   81..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions