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Job DescriptionP17115
Confidence91.31%DateThu Jan 5 11:35:59 GMT 2012
Rank135Aligned Residues137
% Identity14%Templatec1s1hB_
PDB info PDB header:ribosomeChain: B: PDB Molecule:40s ribosomal protein s0-a; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1h,4 contains 40s subunit. the 60s ribosomal subunit is in file5 1s1i.
Resolution11.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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Query Sequence  ASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYS
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Template Sequence  VGKTWEKLVLAARIIAA. . IPNPEDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPR
Template Known Secondary structure  ..TTTT



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Query Sequence  GGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG
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Template Sequence  SD. . . . AQAIKEASYVNIPVIALTDLDSPS. . EFVDVAIPCNNR. . . . . . . . . . . . GKHSIGLIWYLLAREVLRLRG
Template Known Secondary structure  TT....T


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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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