Job Description P17115 Confidence 84.15% Date Thu Jan 5 11:35:59 GMT 2012 Rank 159 Aligned Residues 141 % Identity 14% Template c1ogyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:periplasmic nitrate reductase; PDBTitle: crystal structure of the heterodimeric nitrate reductase2 from rhodobacter sphaeroides Resolution 3.2 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40							.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.																											.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.																											.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	D	D	F	V	R	A	A	N	I	I	L	H	.	.	.	.	.	.	C	E	G	K	V	V	V	S	G	I	G	K	S	G	H	I	G	K	K	I	A	A	T	L	A	S	.	.	T	G	T	P	A	F	F	V	H	P	A	E	A	L	H	G	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation															.	.	.	.	.	.																											.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.			.																								.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.
Template Sequence		D	E	A	F	D	V	M	A	A	Q	A	K	L	V	L	K	E	K	A	P	E	.	A	V	G	M	F	G	S	G	Q	W	T	I	W	E	G	Y	A	A	S	K	L	M	R	A	G	F	R	S	N	N	L	D	P	N	A	R	H	C	M	A	S	A	A	T	A	F	M	R	T	F	G	M	D	E	P	M	G	C
Template Known Secondary structure																			T		G	G	.	G							T	T	S														T	T	S								T					T												S	S		S		S	S
Template Predicted Secondary structure																							.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
			85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.					.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																												.	.	.	.
Query SS confidence		.																												.	.	.	.
Query Sequence		.	G	M	I	E	S	R	D	V	M	L	F	I	S	Y	S	G	G	A	K	E	L	D	L	I	I	P	R	.	.	.	.	L	E	D	K	S	I	A	L	L	A	M	T	G	K	P	T	S	P	L	G	L	A	A	K	A	V	L	D	I	S	V	E	R	E	A	C	P	M	H	L	A	P	T	S	S	T	V	N
Query Conservation		.																												.	.	.	.
Alig confidence		.																												.	.	.	.												.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	D	D	F	E	A	A	D	A	F	V	L	W	G	S	N	M	A	E	M	H	P	I	L	W	S	R	L	T	D	R	R	L	S	H	E	H	V	R	V	A	V	L	.	S	T	F	T	H	R	S	S	D	L	S	D	T	P	I	I	F	R	P	G	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	R
Template Known Secondary structure		T	T						S						S							S														S	T	T							.		S	S	B		G	G	G	G	S		S							T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																													.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.														.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	M	M	G	D	A	L	A	M	A	V	M	Q	A	R	G	F	N	E	E	D	F	A	R	S	H
Query Conservation
Alig confidence						.	.										.
Template Conservation						.	.										.
Template Sequence		A	I	L	N	.	.	Y	I	A	H	H	I	I	S	T	.	G	R	V	N	R	D	F	V	D	R	H
Template Known Secondary structure						.	.									T	.	T
Template Predicted Secondary structure						.	.										.
Template SS confidence
		239	240	.	.			.	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.	.	260	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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