Job Description P17115 Confidence 87.05% Date Thu Jan 5 11:35:59 GMT 2012 Rank 151 Aligned Residues 142 % Identity 11% Template c1kqgA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:formate dehydrogenase, nitrate-inducible, major subunit; PDBTitle: formate dehydrogenase n from e. coli Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		28	.	30	.	.	.	.	.	.	.	.	.	40																		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.																				.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.																				.	.	.	.
Query Sequence		G	D	D	F	V	R	A	A	N	I	I	L	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	E	G	K	V	V	V	S	G	I	G	K	S	G	H	I	G	K	K	I	A	A	T	L	A	S	.	T	G	T	P	A	F	F	V	H	P	A	E	A	L	H	G	D	L	G	.	.	.	.
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.																				.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.																				.	.	.	.
Template Conservation
Template Sequence		E	E	A	F	S	R	I	A	K	L	M	K	A	D	R	D	A	N	F	I	E	K	N	E	Q	G	V	T	V	N	R	W	L	S	T	G	M	L	C	A	S	G	A	S	N	E	T	G	M	L	T	Q	K	F	A	R	S	L	G	M	L	A	V	D	N	Q	A	R	V	H	G	P	T	V	A	S	L	A	P	T
Template Known Secondary structure																									T	T	S						B		S							T	T	S															T	T	B						G	G	G
Template Predicted Secondary structure
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
													86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.				.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	M	I	E	S	R	D	V	M	L	F	I	S	Y	S	G	G	A	.	.	.	K	E	L	D	L	I	I	P	R	L	E	D	K	S	I	A	L	L	A	M	T	G	K	P	T	S	P	L	G	L	A	A	K	A	V	L	D	I	S	V	E	R	E	A	C	P	M	H	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																		.	.	.																					.																							.	.	.	.	.	.
Template Conservation																																																					.																							.	.	.	.	.	.
Template Sequence		F	G	R	G	A	M	T	N	H	W	V	D	I	K	N	A	N	V	V	M	V	M	G	G	N	A	A	E	A	H	P	V	G	F	R	W	A	M	E	A	K	N	N	N	D	A	T	L	I	V	V	.	D	P	R	F	T	R	T	A	S	V	A	D	I	Y	A	P	I	R	S	G	T	D	.	.	.	.	.	.
Template Known Secondary structure			S			S		S	S		T	G	G	G	G	G		S						S							S														S								.		S	S							T		S							T	T			.	.	.	.	.	.
Template Predicted Secondary structure																																																					.																							.	.	.	.	.	.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	T	S	S	T	V	N	T	L	M	M	G	D	A	L	A	M	A	V	M	Q	A	R	G	F	N	E	E	D	F	A	R	S	H
Query Conservation
Alig confidence		.	.	.	.	.	.	.						.	.										.
Template Conservation		.	.	.	.	.	.	.						.	.										.
Template Sequence		.	.	.	.	.	.	.	I	T	F	L	S	.	.	G	V	L	R	Y	L	I	E	N	.	N	K	I	N	A	E	Y	V	K	H	Y
Template Known Secondary structure		.	.	.	.	.	.	.						.	.									T	.	T		S
Template Predicted Secondary structure		.	.	.	.	.	.	.						.	.										.
Template SS confidence
									281	.	.	.	.			.	.	.	.	290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions