Job Description P17115 Confidence 93.66% Date Thu Jan 5 11:35:59 GMT 2012 Rank 127 Aligned Residues 142 % Identity 11% Template c1h0hA_ PDB info PDB header:dehydrogenase Chain: A: PDB Molecule:formate dehydrogenase (large subunit); PDBTitle: tungsten containing formate dehydrogenase from2 desulfovibrio gigas Resolution 1.8 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40																		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.																				.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.																				.	.	.	.
Query Sequence		G	D	D	F	V	R	A	A	N	I	I	L	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	E	G	K	V	V	V	S	G	I	G	K	S	G	H	I	G	K	K	I	A	A	T	L	A	S	.	T	G	T	P	A	F	F	V	H	P	A	E	A	L	H	G	D	L	G	.	.	.	.
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.																				.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.																				.	.	.	.
Template Conservation
Template Sequence		D	W	M	L	D	T	I	A	E	R	V	A	K	T	R	E	A	T	F	V	T	K	N	A	K	G	Q	V	V	N	R	C	D	G	I	A	S	V	G	S	A	A	M	D	N	E	E	C	W	I	Y	Q	A	W	L	R	S	L	G	L	F	Y	I	E	H	Q	A	R	I	H	S	A	T	V	A	A	L	A	E	S
Template Known Secondary structure																									T	T	S								S							T	T	S															T	T	B						G	G	G
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
													86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																							.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																							.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	M	I	E	S	R	D	V	M	L	F	I	S	Y	S	G	G	A	K	E	L	D	L	.	.	I	I	P	R	L	E	D	K	S	I	A	L	L	A	M	T	G	K	P	T	S	P	L	G	L	A	A	K	A	V	L	D	I	S	V	E	R	E	A	C	P	M	H	L	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																							.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																							.	.																.																							.	.	.	.	.	.	.
Template Conservation																																																				.																							.	.	.	.	.	.	.
Template Sequence		Y	G	R	G	A	M	T	N	H	W	I	D	L	K	N	S	D	V	I	L	M	M	G	S	N	P	A	E	N	H	P	I	S	F	K	W	V	M	R	A	K	D	K	G	A	T	L	I	H	V	.	D	P	R	Y	T	R	T	S	T	K	C	D	L	Y	A	P	L	R	S	G	S	D	.	.	.	.	.	.	.
Template Known Secondary structure			S			S		S	S		T	G	G	G	G	G		S						S							S	T	T											T	T							.		S	S			T	T	G	G	G		S							T	T			.	.	.	.	.	.	.
Template Predicted Secondary structure																																																				.																							.	.	.	.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	S	S	T	V	N	T	L	M	M	G	D	A	L	A	M	A	V	M	Q	A	R	G	F	N	E	E	D	F	A	R	S	H
Query Conservation
Alig confidence		.	.	.	.	.	.						.	.										.
Template Conservation		.	.	.	.	.	.						.	.										.
Template Sequence		.	.	.	.	.	.	I	A	F	L	N	.	.	G	M	T	K	Y	I	L	E	K	.	E	L	Y	F	K	D	Y	V	V	N	Y
Template Known Secondary structure		.	.	.	.	.	.						.	.									T	.	T		S
Template Predicted Secondary structure		.	.	.	.	.	.						.	.										.
Template SS confidence
								242	.	.	.	.			.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions