Job Description Q46821 Confidence 96.12% Date Thu Jan 5 12:34:46 GMT 2012 Rank 2 Aligned Residues 424 % Identity 9% Template d1pw4a_ SCOP info MFS general substrate transporter MFS general substrate transporter Glycerol-3-phosphate transporter Resolution 3.30

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.					.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																								.	.	.	.
Query SS confidence																																								.	.	.	.
Query Sequence		L	P	S	S	S	G	Q	D	R	P	T	D	E	V	D	R	I	L	S	P	G	K	L	I	I	L	G	L	Q	H	V	L	V	M	Y	A	G	A	.	.	.	.	V	A	V	P	L	M	I	G	D	R	L	G	L	S	K	E	A	I	A	M	L	I	S	S	D	L	F	C	C	G	I	V	T	L	L	Q	C	I
Query Conservation																																								.	.	.	.
Alig confidence																																								.	.	.	.
Template Conservation
Template Sequence		K	P	A	P	H	K	A	R	L	P	A	A	E	I	D	P	T	Y	R	R	L	R	W	Q	I	F	L	G	I	F	F	G	Y	A	A	Y	Y	L	V	R	K	N	F	A	L	A	M	P	Y	L	V	E	Q	G	F	S	R	G	D	L	G	F	A	L	S	G	I	S	I	A	Y	G	F	S	K	F	I	M	G	S
Template Known Secondary structure													S																													T	S								T	T	S	S	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																															.																											.
Query SS confidence																															.																											.
Query Sequence		G	I	G	R	F	M	G	I	R	L	P	V	I	M	S	V	T	F	A	A	V	T	P	M	I	A	I	G	M	.	N	P	D	I	G	L	L	G	I	F	G	A	T	I	A	A	G	F	I	T	T	L	L	A	P	L	.	I	G	R	L	M	P	L	F	P	P	L	V	T	G	V	V	I	T	S	I	G	L	S
Query Conservation																															.																											.
Alig confidence						.																									.																											.
Template Conservation						.
Template Sequence		V	S	D	R	.	S	N	P	R	V	F	L	P	A	G	L	I	L	A	A	A	V	M	L	F	M	G	F	V	P	W	A	T	S	S	I	A	V	M	F	V	L	L	F	L	C	G	W	F	Q	G	M	G	W	P	P	C	G	R	T	M	V	H	W	W	S	Q	K	E	R	G	G	I	V	S	V	W	N	C	A
Template Known Secondary structure						.	S																												S	S	S	S																T										T	T		T	T	T
Template Predicted Secondary structure						.
Template SS confidence
		86	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	Q	V	G	I	D	W	A	A	G	G	K	G	N	P	Q	Y	G	N	P	V	Y	L	G	I	S	F	A	V	L	I	F	I	L	L	I	T	R	Y	A	K	G	F	M	S	N	V	A	V	L	L	G	I	V	F	G	F	L	L	S	W	M	M	N	E	V	N	L	S	G	L	H	D	A	S	W	F	A	I
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	G	G	I	P	P	L	L	F	L	L	G	M	A	W	F	N	D	W	H	A	A	L	Y	M	P	A	F	C	A	I	L	V	A	L	F	A	F	A	M	M	R	D	T	P	Q	S	C	G	L	P	P	I	E	E	Y
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	S												T			S	T	T		T																					S	S	T	T	T				S		T	T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		165	.																						.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	P	M	S	F	G	M	P	I	F	D	P	V	S	I	L	T	M	T	A	V	L	I	I	V	F	I	E	S	M	G	M	F	L	A	L	G	E	I	V	G	R	K	L	S	S	H	D	I	I	R	G	L	R	V	D	G	V	G	T	M	I	G	G	T	F	N	S	F	P	H	T	S	F	S	Q	N	V	G
Query Conservation
Alig confidence																																																																													.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		K	N	D	T	A	K	Q	I	F	M	Q	Y	V	L	P	N	K	L	L	W	Y	I	A	I	A	N	V	F	V	Y	L	L	R	Y	G	I	L	D	W	S	P	T	Y	L	K	E	V	K	H	F	A	L	D	K	S	S	W	A	Y	F	L	Y	E	Y	A	G	I	P	G	T	L	L	C	G	W	.	.	.	.	.
Template Known Secondary structure							T							T	S	S																													B	T	T	B	S																												.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	S	V	T	R	V	H	S	R	W	V	C	I	S	S	G	I	I	L	I	L	F	G	M	V	P	K	M	A	V	L	V	A	S	I	P	Q	F	V	L	G	G	A	G	L	V	M	F	G	M	V	L	A	T	G	I	R	I	L	S	R	C	N	Y	T	T	N	R	Y	N	L	Y	I	V	A	I	S	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	S	D	K	V	F	R	G	N	R	G	A	T	G	V	F	F	M	T	L	V	T	I	A	T	I	V	Y	W	M	N	P	A	G	N	P	T	V	D	M	I	C	M	I	V	I	G	F	L	I	Y	G	P	V	M	L	I	G	L	H	A	L	E	L	A	P	K	K	A	A	G	T	A	A	G	F	T	G	L	F
Template Known Secondary structure						T	S	T	T																				T	T	S			T	T																	T													T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420				.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.
Query SS confidence																					.	.	.
Query Sequence		V	G	M	T	P	T	L	S	H	D	F	F	S	K	L	P	A	V	L	.	.	.	Q	P	L	L	H	S	G	I	M	L	A	T	L	S	A	V	V	L	N	V	F	F	N	G	Y	Q	H	H	A	D	L	V	K	E	S	V	S	D
Query Conservation																					.	.	.
Alig confidence																					.	.	.
Template Conservation
Template Sequence		G	Y	L	G	G	S	V	A	A	S	A	I	V	G	Y	T	V	D	F	F	G	W	D	G	G	F	M	V	M	I	G	G	S	I	L	A	V	I	L	L	I	V	V	M	I	G	E	K	R	R	H	E	Q	L	L	Q	E	L	V	P
Template Known Secondary structure																				S	S		S																															G	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.