Return to main results Retrieve Phyre Job Id

Job DescriptionQ46821
Confidence11.09%DateThu Jan 5 12:34:46 GMT 2012
Rank4Aligned Residues406
% Identity8%Templated1pv7a_
SCOP infoMFS general substrate transporter MFS general substrate transporter LacY-like proton/sugar symporter
Resolution3.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50. ........60.........70.........80.........90.........100....
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Query Sequence  GKLIILGLQHVLVMYAGAVAVPLM. . . IGDRLGLSKEAIAMLISSDLFCCGIVTLLQCIGIGRFMGIRLPVIMSVTFAAV
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Template Sequence  TNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDK. LGLRKYLLWIITGMLV
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   7..10.........20.........30.........40.........50.........60......... 70.........80.....
 
   105....110.........120.........130.........140.........150.........160.........170.........180....
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Query Sequence  TPMIAIGMNPDIGLLGIFGATIAAGFITTLLAPLIGRLMPLFPPLVTGVVITSIGLSIIQVGIDWAAGGKGNPQYGNPVY
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Template Sequence  MFAPFFIFIF. . . GPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMF. . . . . . . . . . . . . . . .
Template Known Secondary structure  TT...TT
TTTTGGGGGTTS

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   86...90..... ....100.........110.........120.........130.........140......
 
   185....190.........200.........210.........220.........230.........240.........250.........260....
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Query Sequence  LGISFAVLIFILLITRYAKGFMSNVAVLLGIVFGFLLSWMMNEVNLSGLHDASWFAIVTPMSFGMPIFDPVSILTMTAVL
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Template Sequence  . GCVGWALGASIVGIMFTINNQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGANHSAFSLKLALELFRQPKLWFL
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   147..150.........160.........170.........180.........190.........200.........210.........220.....
 
   265....270.........280.........290.........300.........310.........320.........330.........340....
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Query Sequence  IIVFIESMGMFLALGEIVGRKLSSHDIIRGLRVDGVGTMIGGTFNSFPHTSFSQNVGLVSVTRVHSRWVCISSGIILILF
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Template Sequence  SLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLN. . ASIMFFAPLIINRIGGKNALLLAGTIMSVRI
Template Known Secondary structure  TTSSS
..TT
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   226...230.........240.........250.........260.........270.. .......280.........290.........300...
 
   345....350.........360.........370.........380.........390.... .....400.........410.........420...
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Query Sequence  GMVPKMAVLVASIPQFVLGGAGLVMFGMVLATGIRILSRCNYTTNRYNLY. IVAISLGVGMTPTLSHDFFSKLPAVLQPL
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Template Sequence  IGSSFATSALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYL
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GGGTTT
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   304.....310.........320.........330.........340.........350.........360.........370.........380...
 
   424.....430.........440.........450......
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Query Sequence  LHSGIMLATLSAVVLNVFFNGYQHHADLVKESV
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Template Sequence  VLGLVALGFTLISVFTLSGPGPLSLLRRQVNEV
Template Known Secondary structure  S

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   384.....390.........400.........410......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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