 |
Job Description | P37683 | Confidence | 21.44% | Date | Thu Jan 5 11:56:58 GMT 2012 |
Rank | 129 | Aligned Residues | 58 |
% Identity | 21% | Template | d2ahob2 |
SCOP info | OB-fold
| Nucleic acid-binding proteins
| Cold shock DNA-binding domain-like
|
Resolution | 3.00 |
|
 |
  |   |
283 | . | . | . | |
|
. | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . |
Predicted Secondary structure |   |
 |
|
|
| . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | A | L | P | . |
. |
G | K | V | F | S | G | K | L | A | A | I | S | P | A | V | P | G | G | A | Y | Q | S | T | G | T | L | Q | T | L | N | T | A | P | G | S | D | G | V | I | A | T | I | E | L | D | E | H | T | D | L | S | A | L | P | D | G | I | Y | A | Q | V | A | V | Y | S |
Query Conservation |   |
|
|   |
| . | . |   |   |   |   |   |
|   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |
|   |
|
Alig confidence |   |
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|
|   |   |
|   |
|   |
|   |   |
|   |   |   | . | . | . | . | . | . | . | . | . |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   | . | . |   |   |   |
|   |   |
|   |   |
|
|
|   |
Template Sequence |   |
S | K | L | P | S | E | G | E | I | L | I | A | T | V | K | Q | V | F | D | Y | . |
. |
. |
. |
. |
. |
. |
. |
. |
G | S | Y | V | S | L | D | E | Y | G | G | L | Q | A | F | L | P | W | S | E | V | S | N | I | R | D | V | . |
. |
L | K | E | N | R | K | V | I | V | K | V | I | R |
Template Known Secondary structure |   |
S | S | S |
|
| T | T |
|
|
|  |  |  |  |  |  |  |  | T | T | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  | T | T | T | T | T |  |  |  |  |  |
| G | G | G |
|
|
|  |  |  |  | . | . | T |
| S | S |
|  |  |  |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  | . | . |  |
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
|
. | . | . | . | . | . | . | 60 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|