Job Description P37683 Confidence 99.92% Date Thu Jan 5 11:56:58 GMT 2012 Rank 5 Aligned Residues 223 % Identity 17% Template d1vf7a_ SCOP info HlyD-like secretion proteins HlyD-like secretion proteins HlyD-like secretion proteins Resolution 2.40

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		50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		N	H	P	Y	T	F	K	A	Q	K	A	V	.	I	S	I	P	V	V	P	Q	V	T	G	V	V	I	E	V	T	D	K	K	N	T	L	I	K	K	G	E	V	L	F	R	L	D	P	T	R	Y	Q	A	R	V	D	R	L	M	A	D	I	V	T	A	E	H	K	Q	R	A	L	G	A	E	L	D	E	M	A
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		T	L	N	T	E	L	P	G	R	T	N	A	F	R	I	A	E	V	R	P	Q	V	N	G	I	I	L	K	R	L	F	K	E	G	S	D	V	K	A	G	Q	Q	L	Y	Q	I	D	P	A	T	Y	E	A	D	Y	Q	S	A	Q	A	N	L	A	S	T	Q	E	Q	A	Q	R	Y	K	L	L	V	A	D	Q	A
Template Known Secondary structure														S								S	S									S		S	S					T	T	S																																					T	T	S
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	T	Q	Q	A	K	A	T	R	D	K	F	A	K	E	Y	Q	R	Y	A	R	G	S	Q	A	K	V	N	P	F	S	E	R	D	I	D	V	A	R	Q	N	Y	L	A	Q	E	A	S	V	K	S	S	A	A	E	Q	K	Q	I	Q	S	Q	L	D	S	L	V	L	G	E	H	S	Q	I	A	S	L	K	A
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	S	K	Q	Q	Y	A	D	A	N	A	A	Y	L	Q	S	K	A	A	V	E	Q	A	R	I	N	L	R	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S																												T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.														.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	L	A	E	A	K	Y	N	L	E	Q	T	I	V	R	A	P	S	D	G	Y	V	T	Q	V	L	I	R	P	G	T	Y	A	A	S	L	P	L	R	P	V	M	V	F	I	P	D	Q	K	R	Q	I	V	A	Q	F	R	Q	N	S	L	L	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	G
Query Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	T	K	V	L	S	P	I	S	G	R	I	G	R	S	A	V	T	E	G	A	L	V	T	N	G	Q	A	N	A	M	A	T	V	Q	Q	L	D	P	I	Y	V	D	V	T	Q	P	S	T	A	L	L	R	L	R	R	E	L	A	S	G	Q	L	E	R	A	G	D	N	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	T					S	S	S							S	S		T	T					T	T		S	S		S							S																							T	S	S					T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	A	E	V	V	F	N	A	L	P	G	K	V	F	S	G	K	L	A	A	I	S	P	A	V	P	G	G	A	Y	Q	S	T	G	T	L	Q	T	L	N	T	A	P	G	S	D	G	V	I	A	T	I	E	L	D	E	H	T	D	L	S	A	L	P	D	G	I	Y	A	Q	V	A	V	Y	S	D
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Sequence		A	K	V	S	L	K	L	E	D	G	S	Q	Y	P	L	E	G	R	L	E	F	S	E	V	S	V	D	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	S	V	T	I	R	A	V	F	P	N	P	N	N	E	.	.	L	L	P	G	M	F	V	H	A	Q	L	Q	E	G
Template Known Secondary structure									T	T	S				S	S						S	S		S				S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S						B					S	S	S		.	.			T	T
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.																	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.			.	250	.	.	.	.	.	.	.	.	.	260	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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