Job Description P39902 Confidence 95.97% Date Thu Jan 5 12:01:09 GMT 2012 Rank 4 Aligned Residues 73 % Identity 19% Template c3qnfA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:endoplasmic reticulum aminopeptidase 1; PDBTitle: crystal structure of the open state of human endoplasmic reticulum2 aminopeptidase 1 erap1 Resolution 3.00 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.								.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.
Query Sequence		Q	A	V	M	R	R	L	R	E	K	L	A	Q	A	N	L	K	L	G	R	N	Y	P	E	P	K	L	S	Y	T	Q	R	.	.	.	.	.	.	.	G	T	S	A	G	T	A	W	L	E	S	Y	E	I	R	L	N	P	V	L	L	L	E	N	S	E	A	F	I	E	E	V	V	P	H	E	L	A	H	L	L
Query Conservation																																		.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	Y	A	L	D	A	A	V	T	L	L	E	F	Y	E	D	Y	F	S	I	P	Y	P	L	P	K	Q	D	L	A	A	I	P	D	F	Q	S	G	A	M	E	N	W	G	L	T	T	Y	R	E	S	A	L	L	F	D	A	E	K	S	S	A	S	S	K	L	G	I	T	M	T	V	A	H	E	L	A	H	Q	W
Template Known Secondary structure																				T	S			S	S	S								T	T			S	S					T	T						G	G	G	T				T	T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions