Job Description P39902 Confidence 23.18% Date Thu Jan 5 12:01:09 GMT 2012 Rank 151 Aligned Residues 32 % Identity 13% Template c3eg9A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:protein transport protein sec23a; PDBTitle: crystal structure of the mammalian copii-coat protein2 sec23/24 bound to the transport signal sequence of membrin Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	C	K	C	Q	E	H	Q	L	T	V	R	R	H	N	R	V	V	R	G	E	A	V	Y	R	C	V	H	C	G	E	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	C	S	R	T	T	C	R	A	V	L	N	P	L	C	Q	V	D	Y	R	A	K	L	W	A	C	N	F	C	Y	Q	R
Template Known Secondary structure		B		S		T	T	T			B			T	T	S				T	T	T	T					T	T	T
Template Predicted Secondary structure
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions