Return to main results Retrieve Phyre Job Id

Job DescriptionP39902
Confidence53.91%DateThu Jan 5 12:01:09 GMT 2012
Rank46Aligned Residues72
% Identity17%Templatec3edhA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:bone morphogenetic protein 1; PDBTitle: crystal structure of bone morphogenetic protein 1 protease2 domain in complex with partially bound dmso
Resolution1.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30..... ....40.... .....50.........60.........70......
Predicted Secondary structure 







.......


..





Query SS confidence 





























. . . . . . .








. .































Query Sequence  LPIAIQQAVMRRLREKLAQANLKLGRNYPE. . . . . . . PKLSYTQRG. . TSAGTAWLESYEIRLNPVLLLENSEAFIEEVV
Query Conservation 
  

   
  

      
   
   

 .......
 
    
 ..
 

        
 

  
        
    
Alig confidence 





























.......








..















.......








Template Conservation           
  
  

      




                    
 

      
   
 .......  
     
Template Sequence  IGGNFTGSQRAVFRQAMRHWEKHTCVTFLERTDEDSYIVFTYRPCGCCSYVGRRGGGPQAISIG. . . . . . . KNCDKFGIV
Template Known Secondary structure 
SS

SS

SS
SS

S
S


SS


SS
.......GGG
S
Template Predicted Secondary structure 

























.......







Template SS confidence 















































































   1920.........30.........40.........50.........60.........70.........80.. .......90.
 
   77..80....
Predicted Secondary structure 
Query SS confidence 







Query Sequence  PHELAHLL
Query Conservation   

  
  
Alig confidence 







Template Conservation   

 



Template Sequence  VHELGHVV
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 







   91.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions