Job Description P07648 Confidence 51.01% Date Thu Jan 5 11:00:26 GMT 2012 Rank 27 Aligned Residues 124 % Identity 17% Template d1vzva_ SCOP info Herpes virus serine proteinase, assemblin Herpes virus serine proteinase, assemblin Herpes virus serine proteinase, assemblin Resolution 3.00

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		929	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.																														.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	R	V	I	A	C	R	Q	P	G	Q	S	M	E	I	D	L	A	C	N	G	V	Q	I	T	G	W	L	P	Q	V	Q	P	D	G	L	L	R	W	R	P	S	L	L	S	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	G	M	Q
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	I	V	R	S	A	L	P	P	T	S	K	I	P	I	N	I	D	H	R	K	D	C	V	V	G	E	V	I	A	I	I	E	D	I	R	G	P	F	F	L	G	I	V	R	C	P	Q	L	H	A	V	L	F	E	A	A	H	S	N	F	F	G	N	R	D	S	V	L	S	P	L	E	R	A	L	Y	L	V	T
Template Known Secondary structure									S		S	S							T	T		T	T													S	S	S																				S		T	T	S	S						T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		980	.	.												.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.				.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Query Sequence		L	W	L	.	.	.	.	.	.	.	.	.	.	.	E	H	L	V	Y	C	A	S	G	G	N	G	E	S	R	L	F	L	R	K	D	G	E	W	.	.	.	R	F	P	P	L	A	A	E	Q	A	L	H	Y	L	S	Q	L	I	E	G	Y	R	E	G	M	S	A	P	L	L	V	L	P	E	S	G	G	A	W
Query Conservation					.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Template Conservation
Template Sequence		N	Y	L	P	S	V	S	L	S	S	K	R	L	F	T	H	V	A	L	C	V	V	G	R	R	V	G	T	V	V	N	Y	D	C	T	P	E	S	S	I	E	P	F	R	V	L	S	M	E	S	K	A	R	L	L	S	L	V	K	D	Y	A	G	L	N	K	V	W	K	V	S	E	D	K	L	A	K	V	L	L
Template Known Secondary structure				S								S										S	S		S	S	T	T		B					S	S					S	T	T	B	S	S	S																		T	T
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		1046	.	.	.	1050	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	T	C	Y	D	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	T	A	V	N	N	M
Template Known Secondary structure						T	T	T
Template Predicted Secondary structure
Template SS confidence
		204	.	.	.	.	.	210

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions