Job Description P07648 Confidence 29.98% Date Thu Jan 5 11:00:26 GMT 2012 Rank 31 Aligned Residues 107 % Identity 21% Template d1etea_ SCOP info 4-helical cytokines 4-helical cytokines Short-chain cytokines Resolution 2.20

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		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.									.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.
Query Sequence		C	G	I	S	A	L	P	P	V	Y	L	Q	A	L	Q	A	L	G	K	H	.	.	.	.	.	.	.	.	I	E	I	H	L	L	F	T	N	P	C	R	Y	Y	W	G	D	I	K	D	P	A	Y	L	A	K	L	L	T	R	Q	R	R	H	S	F	E	D	R	E	L	P	L	F	R	D	S	E	N	A	G	Q
Query Conservation																						.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	Q	H	S	P	I	S	S	D	F	A	V	K	I	R	E	L	S	D	Y	L	L	Q	D	Y	P	V	T	V	A	S	N	L	Q	D	D	E	L	C	G	G	L	W	R	L	V	L	A	Q	R	W	M	E	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S	S					T	T										T	T	S		T	T							S		B				T	T	T																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.			.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.		.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure																																						.	.																								.
Query SS confidence																																						.	.																								.
Query Sequence		L	F	N	S	D	G	E	Q	D	V	G	N	P	L	L	A	S	W	G	K	L	G	R	D	Y	I	Y	L	L	S	D	L	E	S	S	Q	.	.	E	L	D	A	F	V	D	V	T	P	D	N	L	L	H	N	I	Q	S	D	I	L	E	.	L	E	N	R	A	V	A	G	V	N	I	E	E	F	S	R	S	D
Query Conservation																																						.	.																								.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.													.											.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	T	V	A	G	S	K	M	Q	G	L	L	E	R	V	N	T	E	I	H	F	V	T	K	C	A	F	Q	P	P	P	S	C	.	L	R	F	V	Q	T	N	I	S	R	L	L	Q	E	T	S	E	Q	L	V	A	L	K	P	W	I	T	R	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S																G	G	G	G	G	S							T	T	.																							T	T	T	T	T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Template SS confidence
																			61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		363
Predicted Secondary structure
Query SS confidence
Query Sequence		N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		123

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions