Job Description P07648 Confidence 30.47% Date Thu Jan 5 11:00:26 GMT 2012 Rank 29 Aligned Residues 175 % Identity 10% Template c3h4rA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:exodeoxyribonuclease 8; PDBTitle: crystal structure of e. coli rece exonuclease Resolution 2.80 Å

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		832	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	L	E	T	L	Q	R	F	W	A	H	P	V	R	A	F	F	Q	M	R	L	Q	V	N	F	R	T	E	D	S	E	I	P	D	T	E	P	F	I	L	E	G	L	S	R	Y	Q	I	N	Q	Q	L	L	N	A	L	V	E	Q	D	D	A	E	R	L	F	R	R	F	R	A	A	G	D	L	P	Y	G	A
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.						.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.						.	.	.	.	.	.
Template Sequence		I	S	K	S	Q	L	D	D	I	A	D	T	P	A	L	Y	L	W	R	K	N	A	P	V	D	T	T	K	T	K	.	.	.	.	.	.	.	.	.	.	.	.	T	L	D	L	G	T	A	F	H	C	R	V	L	.	.	.	.	.	.	E	L	E	E	F	.	.	.	.	.	.	S	N	R	A	E	E	G	R
Template Known Secondary structure		B																			T	T	S								S	.	.	.	.	.	.	.	.	.	.	.	.			T										S	.	.	.	.	.	.	S					.	.	.	.	.	.	T						T	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.						.	.	.	.	.	.
Template SS confidence
		614	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.													.	.	.	.	.	.	650	.	.	.	.	.	.							.	.	.	660	.							.	.	.	.	.	.	.	.
		912	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.		.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.			.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.
Predicted Secondary structure																							.																																.	.																						.	.	.	.
Query SS confidence																							.																																.	.																						.	.	.	.
Query Sequence		F	G	E	I	F	W	E	T	Q	C	Q	E	M	Q	Q	L	A	D	R	V	I	.	A	C	R	Q	P	G	Q	S	M	E	I	D	L	A	C	N	G	V	Q	I	T	G	W	L	P	Q	V	Q	P	D	G	.	.	L	L	R	W	R	P	S	L	L	S	V	A	Q	G	M	Q	L	W	L	E	H	.	.	.	.
Query Conservation																							.																																.	.																						.	.	.	.
Alig confidence		.	.																				.																																.	.									.													.	.	.	.
Template Conservation		.	.																																																														.
Template Sequence		.	.	K	I	E	L	M	Y	Q	S	V	M	A	L	P	L	G	Q	W	L	V	E	S	A	G	H	A	E	S	S	I	Y	W	E	D	P	E	T	G	I	L	C	R	C	R	P	D	K	I	I	P	E	F	H	W	I	M	D	V	K	T	T	A	.	D	I	Q	R	F	K	T	A	Y	Y	D	Y	R	Y	H	V
Template Known Secondary structure		.	.										T	T	S								S	S	S		B	S	S								T	T	T									S				G	G	G	T									S	.													T	T	T
Template Predicted Secondary structure		.	.																																																														.
Template SS confidence
				704	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.		.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780
									985	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.										.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	L	V	Y	C	A	S	G	G	N	G	E	S	R	L	F	L	R	K	D	.	.	.	.	.	.	.	.	.	G	E	W	R	F	P	P	L	A	A	E	Q	A	L	H	Y	L	S	Q	L	I	E	G	Y	R	E	G	M	S	A
Query Conservation		.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	D	A	F	Y	S	D	G	Y	E	A	Q	F	G	V	Q	P	T	F	V	F	L	V	A	S	T	T	I	E	C	G	R	Y	P	V	E	I	F	M	M	G	E	E	A	K	L	A	G	Q	Q	E	Y	H	R	N	L	R	T	L	S	D	C	L	N	T
Template Known Secondary structure															S	S											S	S		B	T	T	B																																	T
Template Predicted Secondary structure
Template SS confidence
		781	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions