Return to main results Retrieve Phyre Job Id

Job DescriptionP07648
Confidence9.74%DateThu Jan 5 11:00:26 GMT 2012
Rank58Aligned Residues44
% Identity20%Templatec3dmqA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:rna polymerase-associated protein rapa; PDBTitle: crystal structure of rapa, a swi2/snf2 protein that2 recycles rna polymerase during transcription
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30.........40.........50.........60
Predicted Secondary structure 













Query SS confidence 












































Query Sequence  LMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI
Query Conservation   
   
   
   
     


 
     

   

   

 


Alig confidence 





























.













Template Conservation 

   
            


 
  
  

.  
           
Template Sequence  EAGXILHQQLLSGAAERVLIIVPETLQHQW. LVEXLRRFNLRFAL
Template Known Secondary structure  TSS




TTT.S



Template Predicted Secondary structure 







.




Template SS confidence 












































   186...190.........200.........210..... ....220.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions